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scnpilot_solids1_trim150_scaffold_1069_curated

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1069_curated_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(1..2004)
DNA (2004bp) protein (668aa)
7TM receptor with intracellular metal dependent phosphohydrolase n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XRD9_9BACT
Metal dependent phosphohydrolase {ECO:0000313|EMBL:AHG90891.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein; K07037
scnpilot_solids1_trim150_scaffold_1069_curated_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(2004..2966)
DNA (963bp) protein (321aa)
PhoH-like protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A946_GEMAT
PhoH family protein {ECO:0000313|EMBL:AHG90892.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PhoH-like protein; K06217 phosphate starvation-inducible protein PhoH and related proteins
scnpilot_solids1_trim150_scaffold_1069_curated_3
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


comp(2959..4752)
DNA (1794bp) protein (598aa)
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12); K01876 aspartyl-tRNA synthetase [EC:6.1.1.12]
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:BAH38757.1}; EC=6.1.1.12 {ECO:0000313|EMBL:BAH38757.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Aspartate--tRNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A947_GEMAT
scnpilot_solids1_trim150_scaffold_1069_curated_4
CG_Mariprof_02, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4753..4995)
DNA (243bp) protein (81aa)
hypothetical protein id=12555136 bin=CNBR_ACIDO species=Anaeromyxobacter dehalogenans genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=CG_Mariprof_02
scnpilot_solids1_trim150_scaffold_1069_curated_5
unknown

Not on your lists

5103..5549
DNA (447bp) protein (149aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1069_curated_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

5664..6839
DNA (1176bp) protein (392aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}
hypothetical protein; K06941 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RLMN_GEMAT
scnpilot_solids1_trim150_scaffold_1069_curated_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(6768..7229)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A950_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:AHG90896.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1069_curated_8
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(7226..7813)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A951_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH38761.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
scnpilot_solids1_trim150_scaffold_1069_curated_9
Thermobacillus composti, Thermobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(7810..8676)
DNA (867bp) protein (289aa)
Bifunctional protein GlmU n=1 Tax=Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4) RepID=L0EKE6_THECK
UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=717605 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Thermobacillus.;" source="Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4).;"
scnpilot_solids1_trim150_scaffold_1069_curated_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(8637..9140)
DNA (504bp) protein (168aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:2.7.6.3); K00950 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WAN0_9GAMM
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
scnpilot_solids1_trim150_scaffold_1069_curated_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(9137..9460)
DNA (324bp) protein (108aa)
Dihydroneopterin aldolase {ECO:0000313|EMBL:AHG90898.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
scnpilot_solids1_trim150_scaffold_1069_curated_12
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(9562..10350)
DNA (789bp) protein (263aa)
trpA; tryptophan synthase alpha chain (EC:4.2.1.20); K01695 tryptophan synthase alpha chain [EC:4.2.1.20]
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Tryptophan synthase alpha chain n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A952_GEMAT
scnpilot_solids1_trim150_scaffold_1069_curated_13
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(10403..11923)
DNA (1521bp) protein (507aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A953_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
scnpilot_solids1_trim150_scaffold_1069_curated_14
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(11927..13621)
DNA (1695bp) protein (565aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A954_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
scnpilot_solids1_trim150_scaffold_1069_curated_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(13618..14820)
DNA (1203bp) protein (401aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
trpB; tryptophan synthase subunit beta (EC:4.2.1.20); K01696 tryptophan synthase beta chain [EC:4.2.1.20]
Tryptophan synthase beta chain n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A955_GEMAT
scnpilot_solids1_trim150_scaffold_1069_curated_16
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(14817..15467)
DNA (651bp) protein (217aa)
trpF; N-(5'-phosphoribosyl)anthranilate isomerase (EC:5.3.1.24); K01817 phosphoribosylanthranilate isomerase [EC:5.3.1.24]
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123176};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
N-(5'-phosphoribosyl)anthranilate isomerase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3U1_GEMAT
scnpilot_solids1_trim150_scaffold_1069_curated_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(15454..16245)
DNA (792bp) protein (264aa)
Indole-3-glycerol phosphate synthase {ECO:0000256|SAAS:SAAS00046689}; EC=4.1.1.48 {ECO:0000256|SAAS:SAAS00046705};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
trpC; indole-3-glycerol phosphate synthase (EC:4.1.1.48); K01609 indole-3-glycerol phosphate synthase [EC:4.1.1.48]
Indole-3-glycerol phosphate synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3U2_GEMAT
scnpilot_solids1_trim150_scaffold_1069_curated_18
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

16375..16734
DNA (360bp) protein (120aa)
lexA; LexA repressor (EC:3.4.21.88); K01356 repressor LexA [EC:3.4.21.88]
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
LexA repressor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3U3_GEMAT
Displaying 18 items

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