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scnpilot_solids1_trim150_scaffold_1466_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1466_curated_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(3..1310)
DNA (1308bp) protein (436aa)
TonB-dependent outer membrane transport protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9M9_GEMAT
TonB-dependent receptor plug {ECO:0000313|EMBL:AHG87880.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
TonB-dependent outer membrane transport protein; K02014 iron complex outermembrane recepter protein
scnpilot_solids1_trim150_scaffold_1466_curated_2
unknown

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comp(1408..1794)
DNA (387bp) protein (129aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1466_curated_3
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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comp(1874..3328)
DNA (1455bp) protein (485aa)
exoribonuclease II; K01147 exoribonuclease II [EC:3.1.13.1]
ribonuclease II n=1 Tax=Armatimonadetes bacterium JGI 0000077-K19 RepID=UPI0003B66C2A
Tax=RBG_13_Acidobacteria_68_16_curated
scnpilot_solids1_trim150_scaffold_1466_curated_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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4026..5474
DNA (1449bp) protein (483aa)
Outer membrane efflux protein {ECO:0000313|EMBL:AHG91301.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
putative cation efflux system protein CzcC; K15725 cobalt-zinc-cadmium resistance protein CzcC id=24417826 bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
outer membrane efflux protein; K15725 cobalt-zinc-cadmium resistance protein CzcC
scnpilot_solids1_trim150_scaffold_1466_curated_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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5471..6706
DNA (1236bp) protein (412aa)
RND family efflux transporter, MFP subunit n=1 Tax=Rhodanobacter denitrificans RepID=M4NK94_9GAMM
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:AHG91302.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
RND family efflux transporter, MFP subunit
scnpilot_solids1_trim150_scaffold_1466_curated_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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6703..7554
DNA (852bp) protein (284aa)
Heavy metal efflux pump CzcA n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IUJ6_KORVE
Heavy metal efflux pump, CzcA family {ECO:0000313|EMBL:AHG91303.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
heavy metal efflux pump CzcA; K15726 cobalt-zinc-cadmium resistance protein CzcA
scnpilot_solids1_trim150_scaffold_1466_curated_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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7551..9869
DNA (2319bp) protein (773aa)
Heavy metal efflux pump, cobalt-zinc-cadmium n=1 Tax=Rhodanobacter denitrificans RepID=M4NSK1_9GAMM
Heavy metal efflux pump, CzcA family {ECO:0000313|EMBL:AHG91303.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
heavy metal efflux pump, cobalt-zinc-cadmium
scnpilot_solids1_trim150_scaffold_1466_curated_8
unknown

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9869..9985
DNA (117bp) protein (39aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1466_curated_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(9987..13280)
DNA (3294bp) protein (1098aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACD2_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:AHG88125.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1466_curated_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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13561..16002
DNA (2442bp) protein (814aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
DNA topoisomerase I (EC:5.99.1.2)
hypothetical protein n=1 Tax=Nodosilinea nodulosa RepID=UPI0002D94F64
scnpilot_solids1_trim150_scaffold_1466_curated_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(16103..16615)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9E2_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:AHG93551.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
Displaying 11 items

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