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scnpilot_solids1_trim150_scaffold_3705_curated

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_3705_curated_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(3..521)
DNA (519bp) protein (173aa)
Putative outer membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABW6_GEMAT
TonB-dependent outer membrane protein, SusC/RagA {ECO:0000313|EMBL:AHG91230.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
putative outer membrane protein
scnpilot_solids1_trim150_scaffold_3705_curated_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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861..2471
DNA (1611bp) protein (537aa)
peptidase M28 id=12557731 bin=CNBR_ACIDO species=Hymenobacter norwichensis genus=Hymenobacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
peptidase M28
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
scnpilot_solids1_trim150_scaffold_3705_curated_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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2617..3864
DNA (1248bp) protein (416aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADD7_GEMAT
MacB-like periplasmic core domain protein {ECO:0000313|EMBL:AHG90438.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical membrane protein
scnpilot_solids1_trim150_scaffold_3705_curated_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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3874..5124
DNA (1251bp) protein (417aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7H6_GEMAT
MacB-like periplasmic core domain protein {ECO:0000313|EMBL:AHG90437.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical membrane protein; K02004 putative ABC transport system permease protein
scnpilot_solids1_trim150_scaffold_3705_curated_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(5141..5656)
DNA (516bp) protein (172aa)
Uncharacterized protein {ECO:0000313|EMBL:AHG87811.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
scnpilot_solids1_trim150_scaffold_3705_curated_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(5653..6066)
DNA (414bp) protein (138aa)
beta-N-acetylhexosaminidase., beta-lactamase (EC:3.5.2.6 3.2.1.52)
Beta-N-acetylhexosaminidase., Beta-lactamase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJI0_RHOMR
Beta-lactamase {ECO:0000313|EMBL:AHG93867.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 6 items

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