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scnpilot_solids1_trim150_scaffold_1687_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1687_curated_1
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(484..1707)
DNA (1224bp) protein (408aa)
UBA/THIF-type NAD/FAD binding protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8J681_ANAD2
UBA/THIF-type NAD/FAD binding protein; K11996 adenylyltransferase and sulfurtransferase
UBA/THIF-type NAD/FAD binding protein {ECO:0000313|EMBL:ACL66976.1}; TaxID=455488 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258).;"
scnpilot_solids1_trim150_scaffold_1687_curated_2
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1711..1983)
DNA (273bp) protein (91aa)
ThiamineS protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HGE1_ANADF
sulfur transfer protein ThiS
ThiamineS protein {ECO:0000313|EMBL:ABS27787.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
scnpilot_solids1_trim150_scaffold_1687_curated_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(2047..2994)
DNA (948bp) protein (316aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00080104}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
homoserine kinase (EC:2.7.1.39)
Homoserine kinase n=1 Tax=Synechococcus sp. (strain ATCC 27167 / PCC 6312) RepID=K9RU86_SYNP3
scnpilot_solids1_trim150_scaffold_1687_curated_4
R_Alphaproteobacteria_40_19, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2991..4058)
DNA (1068bp) protein (356aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase; K00606 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SS04_9BACT
Tax=RIFCSPLOWO2_02_FULL_Alphaproteobacteria_40_19_curated
scnpilot_solids1_trim150_scaffold_1687_curated_5
RBG_13_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

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comp(4060..4290)
DNA (231bp) protein (77aa)
aspartate transaminase; K10907 aminotransferase [EC:2.6.1.-]
Tax=RBG_13_Chloroflexi_56_8_curated
scnpilot_solids1_trim150_scaffold_1687_curated_6
unknown

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4573..4974
DNA (402bp) protein (134aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1687_curated_7
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

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5301..5690
DNA (390bp) protein (130aa)
Uncharacterized protein n=3 Tax=mine drainage metagenome RepID=T1B211_9ZZZZ
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
scnpilot_solids1_trim150_scaffold_1687_curated_8
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5731..6327
DNA (597bp) protein (199aa)
Transcriptional regulator, TetR family n=1 Tax=Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 / ALEN2) RepID=L0DRD2_THIND
dhaR_[H]; Transcriptional regulator, TetR family
Tax=RBG_16_Betaproteobacteria_66_20_curated
scnpilot_solids1_trim150_scaffold_1687_curated_9
Streptomyces sp. HPH0547, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6655..7893
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Streptomyces sp. HPH0547 RepID=S3BPY6_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD90734.1}; TaxID=1203592 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HPH0547.;"
scnpilot_solids1_trim150_scaffold_1687_curated_10
unknown

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comp(7931..8071)
DNA (141bp) protein (47aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1687_curated_11
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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8209..9021
DNA (813bp) protein (271aa)
AraC family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6E8_GEMAT
AraC family transcriptional regulator
AraC family transcriptional regulator {ECO:0000313|EMBL:BAH37808.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
scnpilot_solids1_trim150_scaffold_1687_curated_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

9239..9583
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037E5928
Transcriptional regulator, PadR-family {ECO:0000313|EMBL:AHG87931.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PadR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_1687_curated_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

9629..11587
DNA (1959bp) protein (653aa)
Permease {ECO:0000313|EMBL:AHG93091.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical membrane protein id=12556345 bin=CNBR_ACIDO species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical membrane protein
Displaying 13 items

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