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scnpilot_solids1_trim150_scaffold_3682_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_3682_curated_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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327..1250
DNA (924bp) protein (308aa)
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54); K03856 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEG0_GEMAT
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:AHG91977.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
scnpilot_solids1_trim150_scaffold_3682_curated_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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1250..1903
DNA (654bp) protein (218aa)
pheA; prephenate dehydratase (EC:4.2.1.51); K04518 prephenate dehydratase [EC:4.2.1.51]
Prephenate dehydratase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEG1_GEMAT
Prephenate dehydratase {ECO:0000313|EMBL:AHG89951.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
scnpilot_solids1_trim150_scaffold_3682_curated_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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1897..2298
DNA (402bp) protein (134aa)
aroH; chorismate mutase (EC:5.4.99.5); K06208 chorismate mutase [EC:5.4.99.5]
Chorismate mutase n=1 Tax=Synechococcus sp. (strain JA-3-3Ab) RepID=Q2JW33_SYNJA
Chorismate mutase {ECO:0000313|EMBL:AHG89950.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
scnpilot_solids1_trim150_scaffold_3682_curated_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

2707..3234
DNA (528bp) protein (176aa)
MarR family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4Q0_GEMAT
Regulatory protein MarR {ECO:0000313|EMBL:AHG87653.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
MarR family transcriptional regulator; K15973 MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor
scnpilot_solids1_trim150_scaffold_3682_curated_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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3298..3879
DNA (582bp) protein (194aa)
YceI-like family protein n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D495_MYXXD
YceI family protein {ECO:0000313|EMBL:AHG88397.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
YceI-like family protein
scnpilot_solids1_trim150_scaffold_3682_curated_6
Deinococcus gobiensis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

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4486..4908
DNA (423bp) protein (141aa)
ABC transporter-like protein n=1 Tax=Deinococcus gobiensis (strain DSM 21396 / JCM 16679 / CGMCC 1.7299 / I-0) RepID=H8H0R8_DEIGI
ABC transporter-like protein; K15975 glyoxalase family protein
ABC transporter-like protein {ECO:0000313|EMBL:AFD26937.1}; TaxID=745776 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus gobiensis (strain DSM 21396 / JCM 16679 / CGMCC 1.7299 /; I-0).;"
scnpilot_solids1_trim150_scaffold_3682_curated_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

4988..6724
DNA (1737bp) protein (579aa)
phospholipase D/transphosphatidylase; K06131 cardiolipin synthase [EC:2.7.8.-]
Phospholipase D/transphosphatidylase n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2E294_9GAMM
Phospholipase D-like domain protein {ECO:0000313|EMBL:AHG91969.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
scnpilot_solids1_trim150_scaffold_3682_curated_8
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6816..8147
DNA (1332bp) protein (444aa)
amidohydrolase (EC:3.5.1.14); K01436 amidohydrolase [EC:3.5.1.-]
Amidohydrolase n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9L4C9_9SPHN
Amidohydrolase {ECO:0000313|EMBL:EIZ79189.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. Rr 2-17.;"
scnpilot_solids1_trim150_scaffold_3682_curated_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(8183..8569)
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029A240A
Uncharacterized protein {ECO:0000313|EMBL:CDM65850.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_3682_curated_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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9184..10365
DNA (1182bp) protein (394aa)
o-succinylbenzoate synthase {ECO:0000256|HAMAP-Rule:MF_01933}; Short=OSB synthase {ECO:0000256|HAMAP-Rule:MF_01933};; Short=OSBS {ECO:0000256|HAMAP-Rule:MF_01933};; EC=4.2.1.113 {ECO:0000256|HAMAP-Rule:MF_01933};; 4-(2'-carboxyphenyl)-4-oxybutyric acid synthase {ECO:0000256|HAMAP-Rule:MF_01933}; o-succinylbenzoic acid synthase {ECO:0000256|HAMAP-Rule:MF_01933}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
menC; O-succinylbenzoate synthase (EC:4.2.1.113); K02549 O-succinylbenzoate synthase [EC:4.2.1.113]
O-succinylbenzoate synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A995_GEMAT
scnpilot_solids1_trim150_scaffold_3682_curated_11
unknown

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10365..10469
DNA (105bp) protein (35aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_3682_curated_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

10549..11781
DNA (1233bp) protein (411aa)
peptidase M20D family protein; K01451 hippurate hydrolase [EC:3.5.1.32]
Peptidase M20D family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A988_GEMAT
Amidohydrolase {ECO:0000313|EMBL:AHG93497.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
scnpilot_solids1_trim150_scaffold_3682_curated_13
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(11828..12406)
DNA (579bp) protein (193aa)
maltose O-acetyltransferase; K00661 maltose O-acetyltransferase [EC:2.3.1.79]
Maltose O-acetyltransferase n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CG67_MYXFH
Maltose O-acetyltransferase {ECO:0000313|EMBL:AEI67419.1}; TaxID=483219 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus (strain ATCC BAA-855 / HW-1).;"
scnpilot_solids1_trim150_scaffold_3682_curated_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(12466..13038)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAD3_GEMAT
hypothetical protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
Displaying 14 items

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