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scnpilot_solids1_trim150_scaffold_1925_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1925_curated_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..761)
DNA (759bp) protein (253aa)
putative NADH-dependent flavin oxidoreductase id=12493906 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
putative NADH-dependent flavin oxidoreductase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids1_trim150_scaffold_1925_curated_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(784..1482)
DNA (699bp) protein (233aa)
extradiol ring-cleavage dioxygenase class III protein subunit B id=12493907 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
extradiol ring-cleavage dioxygenase class III protein subunit B
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids1_trim150_scaffold_1925_curated_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1517..2092)
DNA (576bp) protein (192aa)
YceI id=12493908 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
YceI
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids1_trim150_scaffold_1925_curated_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2130..2750)
DNA (621bp) protein (207aa)
hypothetical protein id=12493909 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids1_trim150_scaffold_1925_curated_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2872..3786
DNA (915bp) protein (305aa)
LysR family transcriptional regulator id=12493910 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
LysR family transcriptional regulator
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids1_trim150_scaffold_1925_curated_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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3898..4290
DNA (393bp) protein (131aa)
putative hydrolase id=12493911 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
putative hydrolase
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_solids1_trim150_scaffold_1925_curated_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4364..4786
DNA (423bp) protein (141aa)
rhodanese-like protein id=12493912 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
rhodanese-like protein
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_solids1_trim150_scaffold_1925_curated_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5127..6239
DNA (1113bp) protein (371aa)
Putative transferase id=12493913 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Putative transferase
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_solids1_trim150_scaffold_1925_curated_9
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6276..6974
DNA (699bp) protein (233aa)
hypothetical protein id=12493914 bin=THIO_HI species=Rhizobium leguminosarum genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=CG_Hydro_01
scnpilot_solids1_trim150_scaffold_1925_curated_10
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7011..7754
DNA (744bp) protein (248aa)
methyltransferase type 12 id=12493915 bin=THIO_HI species=unknown genus=unknown taxon_order=unknown taxon_class=Zetaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
SAM-dependent methyltransferase {ECO:0000313|EMBL:KJE38898.1}; TaxID=137584 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas viridans.;"
methyltransferase type 12
scnpilot_solids1_trim150_scaffold_1925_curated_11
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7744..9033
DNA (1290bp) protein (430aa)
carbamoylphosphate synthase large subunit id=12493916 bin=THIO_HI species=unknown genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=THIO_HI organism_group=Betaproteobacteria
ATP-grasp domain protein {ECO:0000313|EMBL:ERI90850.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
carbamoylphosphate synthase large subunit short form
scnpilot_solids1_trim150_scaffold_1925_curated_12
RBG_13_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

9057..10031
DNA (975bp) protein (325aa)
hypothetical protein id=12493917 bin=THIO_HI species=Roseobacter sp. AzwK-3b genus=Roseobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=RBG_13_Ignavibacteria_36_8_curated
scnpilot_solids1_trim150_scaffold_1925_curated_13
R_OP11_Gottesmanbacteria_39_12b, Gottesmanbacteria, Microgenomates, Bacteria

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10028..10981
DNA (954bp) protein (318aa)
hypothetical protein id=12493918 bin=THIO_HI species=Rhizobium leguminosarum genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_39_12b_curated
scnpilot_solids1_trim150_scaffold_1925_curated_14
Pectobacterium carotovorum, Pectobacterium, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11035..11196
DNA (162bp) protein (54aa)
hypothetical protein id=12493919 bin=THIO_HI species=Rheinheimera sp. A13L genus=Rheinheimera taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
type 12 methyltransferase
Methyltransferase type 12 {ECO:0000313|EMBL:ACT13594.1}; TaxID=561230 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pectobacterium.;" source="Pectobacterium carotovorum subsp. carotovorum (strain PC1).;"
Displaying 14 items

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