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scnpilot_solids1_trim150_scaffold_1741_curated_21

Organism: solids_Lysobacter_1

partial RP 26 / 55 MC: 1 BSCG 26 / 51 ASCG 2 / 38
Location: 9262..9447

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L30 n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D7C2F8 similarity UNIREF
DB: UNIREF100
  • Identity: 87.3
  • Coverage: 63.0
  • Bit_score: 107
  • Evalue 6.00e-21
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.3
  • Coverage: 63.0
  • Bit_score: 109
  • Evalue 2.20e-21
rpmD; 50S ribosomal protein L30; K02907 large subunit ribosomal protein L30 similarity KEGG
DB: KEGG
  • Identity: 86.4
  • Coverage: 59.0
  • Bit_score: 104
  • Evalue 1.60e-20

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Taxonomy

Stenotrophomonas rhizophila → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 186
ATGGCTAACGACAAGACCATCAAGGTCCGCCTGGTCAAGGGCCTGCGCGGCACCCAGTCGCGCCACCGCCTGTCGGTCAAGGCGCTCGGCCTCGGCAAGCTCAACAGCGTCCGCGAACTCAAGGACAGCCCGCAGGTTCGTGGCCTGATCAACAAGGTCCACTACCTTGTGAAGGTGGAGGAGTAA
PROTEIN sequence
Length: 62
MANDKTIKVRLVKGLRGTQSRHRLSVKALGLGKLNSVRELKDSPQVRGLINKVHYLVKVEE*