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scnpilot_solids1_trim150_scaffold_21_curated

Search features with annotation key words

Displaying items 1-30 of 195 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_21_curated_1
unknown

Not on your lists

785..1339
DNA (555bp) protein (185aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_21_curated_2
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1891..2136)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KJK0_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EQM74903.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_21_curated_3
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2505..3272)
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002F9A826
Peptide ABC transporter ATPase {ECO:0000313|EMBL:KDA06217.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
oligopeptide ABC transporter ATPase
scnpilot_solids1_trim150_scaffold_21_curated_4
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3307..5166)
DNA (1860bp) protein (620aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
DNA primase; K02316 DNA primase [EC:2.7.7.-]
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000346C792
scnpilot_solids1_trim150_scaffold_21_curated_5
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5166..6530)
DNA (1365bp) protein (455aa)
Deoxyguanosinetriphosphate triphosphohydrolase {ECO:0000313|EMBL:KJL19023.1}; EC=3.1.5.1 {ECO:0000313|EMBL:KJL19023.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
dgt; dGTP triphosphohydrolase; K01129 dGTPase [EC:3.1.5.1]
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002D63222
scnpilot_solids1_trim150_scaffold_21_curated_6
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6520..7698)
DNA (1179bp) protein (393aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
tRNA-dihydrouridine synthase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KVE3_9MICO
nifR3; tRNA-dihydrouridine synthase
scnpilot_solids1_trim150_scaffold_21_curated_7
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7759..8253
DNA (495bp) protein (165aa)
putative peroxidase; K00432 glutathione peroxidase [EC:1.11.1.9]
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034B4032
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
scnpilot_solids1_trim150_scaffold_21_curated_8
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8289..8963)
DNA (675bp) protein (225aa)
DSBA oxidoreductase n=1 Tax=Microbacterium barkeri RepID=UPI0002FCBA0B
DSBA oxidoreductase {ECO:0000313|EMBL:EQM83987.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
dithiol-disulfide isomerase
scnpilot_solids1_trim150_scaffold_21_curated_9
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9282..10775
DNA (1494bp) protein (498aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KR13_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJQ53229.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_21_curated_10
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11402..12247
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000348A474
Uncharacterized protein {ECO:0000313|EMBL:KJQ54920.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
conserved secreted protein
scnpilot_solids1_trim150_scaffold_21_curated_11
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12307..13113)
DNA (807bp) protein (269aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
uppS; undecaprenyl pyrophosphate synthase; K00806 undecaprenyl diphosphate synthase [EC:2.5.1.31]
UDP pyrophosphate synthase n=1 Tax=Microbacterium barkeri RepID=UPI000314C6BC
scnpilot_solids1_trim150_scaffold_21_curated_12
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(13110..13829)
DNA (720bp) protein (240aa)
DNA repair protein RecO n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KVE0_9MICO
recO; recombinational DNA repair protein; K03584 DNA repair protein RecO (recombination protein O)
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids1_trim150_scaffold_21_curated_13
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13857..14576
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00036BACC8
Uncharacterized protein {ECO:0000313|EMBL:KJQ55546.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_21_curated_14
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14566..16320)
DNA (1755bp) protein (585aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
leuA; isopropylmalate/homocitrate/citramalate synthase; K01649 2-isopropylmalate synthase [EC:2.3.3.13]
2-isopropylmalate synthase n=1 Tax=Microbacterium barkeri RepID=UPI000311A243
scnpilot_solids1_trim150_scaffold_21_curated_15
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16496..17443)
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034637B2
Contig_7, whole genome shotgun sequence {ECO:0000313|EMBL:KIP94194.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
alcohol dehydrogenase GroES domain-containing protein
scnpilot_solids1_trim150_scaffold_21_curated_16
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17445..18365)
DNA (921bp) protein (307aa)
GTPase Era n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00037DCA47
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
era; GTPase; K03595 GTP-binding protein Era
scnpilot_solids1_trim150_scaffold_21_curated_17
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18331..19617)
DNA (1287bp) protein (429aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003499A09
Contig_7, whole genome shotgun sequence {ECO:0000313|EMBL:KIP94199.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
hemolysins
scnpilot_solids1_trim150_scaffold_21_curated_18
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19614..20072)
DNA (459bp) protein (153aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
Endoribonuclease YbeY n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KY98_9MICO
metal-dependent hydrolase; K07042 probable rRNA maturation factor
scnpilot_solids1_trim150_scaffold_21_curated_19
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20069..21190)
DNA (1122bp) protein (374aa)
Phosphate starvation protein PhoH n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KJR3_9MICO
Phosphate starvation protein PhoH {ECO:0000313|EMBL:EQM83913.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
phoH; phosphate starvation-inducible protein PhoH, ATPase; K06217 phosphate starvation-inducible protein PhoH and related proteins
scnpilot_solids1_trim150_scaffold_21_curated_20
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21180..21527)
DNA (348bp) protein (116aa)
HIT-like protein {ECO:0000313|EMBL:KJL36075.1}; EC=3.-.-.- {ECO:0000313|EMBL:KJL36075.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
HIT family hydrolase n=1 Tax=Microbacterium yannicii RepID=UPI0002D3A795
diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase; K02503 Hit-like protein involved in cell-cycle regulation
scnpilot_solids1_trim150_scaffold_21_curated_21
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21542..22270)
DNA (729bp) protein (243aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
hypothetical protein; K09761 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003496CBE
scnpilot_solids1_trim150_scaffold_21_curated_22
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22287..23399)
DNA (1113bp) protein (371aa)
molecular chaperone DnaJ n=1 Tax=Microbacterium barkeri RepID=UPI0003661CEA
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
dnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain; K03686 molecular chaperone DnaJ
scnpilot_solids1_trim150_scaffold_21_curated_23
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23422..24462)
DNA (1041bp) protein (347aa)
Heat-inducible transcription repressor hrcA n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KW49_9MICO
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
transcriptional regulator of heat shock gene; K03705 heat-inducible transcriptional repressor
scnpilot_solids1_trim150_scaffold_21_curated_24
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24515..25747)
DNA (1233bp) protein (411aa)
Oxygen-independent coproporphyrinogen-III oxidase 1 {ECO:0000313|EMBL:KJL19755.1}; EC=1.3.99.22 {ECO:0000313|EMBL:KJL19755.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hemN; coproporphyrinogen III oxidase; K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22]
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L0C7_9MICO
scnpilot_solids1_trim150_scaffold_21_curated_25
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25747..26367)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KVC2_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KDA06231.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_21_curated_26
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26449..28296)
DNA (1848bp) protein (616aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
elongation factor 4 n=1 Tax=Microbacterium barkeri RepID=UPI0002E5A1EC
lepA; membrane GTPase LepA; K03596 GTP-binding protein LepA
scnpilot_solids1_trim150_scaffold_21_curated_27
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28566..29534
DNA (969bp) protein (323aa)
ABC transporter permease n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000349F873
ABC transporter permease {ECO:0000313|EMBL:EYT58989.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
hypothetical protein; K02033 peptide/nickel transport system permease protein
scnpilot_solids1_trim150_scaffold_21_curated_28
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29536..30468
DNA (933bp) protein (311aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0003085301
Oligopeptide transport system permease protein OppC {ECO:0000313|EMBL:KJL19760.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
oppC; oligopeptide transport system permease; K02034 peptide/nickel transport system permease protein
scnpilot_solids1_trim150_scaffold_21_curated_29
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30465..32408
DNA (1944bp) protein (648aa)
Glutathione import ATP-binding protein GsiA {ECO:0000313|EMBL:KJQ55526.1}; EC=3.6.3.- {ECO:0000313|EMBL:KJQ55526.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L089_9MICO
ABC transporter ATPase
scnpilot_solids1_trim150_scaffold_21_curated_30
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32560..34275
DNA (1716bp) protein (572aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KVA6_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EQM83959.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
oppA; extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein
Displaying items 1-30 of 195 in total

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