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scnpilot_solids1_trim150_scaffold_441_curated

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_441_curated_1
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..3688)
DNA (3687bp) protein (1229aa)
PKD domain containing protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4GYN8_CELFA
PKD domain-containing protein
PKD domain containing protein {ECO:0000313|EMBL:AEE47155.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
scnpilot_solids1_trim150_scaffold_441_curated_2
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3754..4113)
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Microbacterium paraoxydans RepID=UPI0003794DE5
Contig_41, whole genome shotgun sequence {ECO:0000313|EMBL:KIP87990.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
scnpilot_solids1_trim150_scaffold_441_curated_3
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4437..5579)
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AEK4_9ACTN
Contig_41, whole genome shotgun sequence {ECO:0000313|EMBL:KIP87989.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_441_curated_4
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5683..7056)
DNA (1374bp) protein (458aa)
Cell surface polysaccharide biosynthesis / Chain length determinant protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AEK5_9ACTN
Contig_41, whole genome shotgun sequence {ECO:0000313|EMBL:KIP87988.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
ATPase
scnpilot_solids1_trim150_scaffold_441_curated_5
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7133..8335)
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AEK7_9ACTN
Contig_41, whole genome shotgun sequence {ECO:0000313|EMBL:KIP87987.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_441_curated_6
Methylobacterium sp. GXF4, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8332..9813)
DNA (1482bp) protein (494aa)
hypothetical protein n=1 Tax=Leucobacter salsicius RepID=UPI00034D5273
Uncharacterized protein {ECO:0000313|EMBL:EIZ83196.1}; TaxID=1096546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. GXF4.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_441_curated_7
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10022..10777
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Leucobacter salsicius RepID=UPI000376E2C2
CDP-alcohol phosphatidyltransferase {ECO:0000313|EMBL:KGH43990.1}; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
wcoE; putative phosphatidylglycerophosphate synthase
scnpilot_solids1_trim150_scaffold_441_curated_8
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10923..11795
DNA (873bp) protein (291aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
dTDP-glucose pyrophosphorylase; K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
glucose-1-phosphate thymidylyltransferase n=1 Tax=Microbacterium barkeri RepID=UPI0003128C1B
scnpilot_solids1_trim150_scaffold_441_curated_9
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11792..12787
DNA (996bp) protein (332aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
rfbB; dTDP-D-glucose 4,6-dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
dTDP-glucose 4,6-dehydratase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1J3_9MICO
scnpilot_solids1_trim150_scaffold_441_curated_10
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12730..14199
DNA (1470bp) protein (490aa)
Putative dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:KJL37252.1}; EC=5.1.3.13 {ECO:0000313|EMBL:KJL37252.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133); K00067 dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]; K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
dTDP-4-dehydrorhamnose reductase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ACA6_9MICO
scnpilot_solids1_trim150_scaffold_441_curated_11
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14511..14741
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000371915C
Uncharacterized protein {ECO:0000313|EMBL:KJQ52474.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
scnpilot_solids1_trim150_scaffold_441_curated_12
Arthrobacter sp. PAMC25486, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14779..15006)
DNA (228bp) protein (76aa)
UPI0003D6C028 related cluster n=1 Tax=unknown RepID=UPI0003D6C028
Uncharacterized protein {ECO:0000313|EMBL:AIY00724.1}; TaxID=1494608 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. PAMC25486.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_441_curated_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15009..15488)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Mycobacterium canettii CIPT 140070010 RepID=L0QIC6_9MYCO
Uncharacterized protein {ECO:0000313|EMBL:KFI70531.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_441_curated_14
Mycobacterium tuberculosis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15505..15822)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Mycobacterium canettii CIPT 140070010 RepID=L0QIC6_9MYCO
Uncharacterized protein {ECO:0000313|EMBL:CRG22623.1}; TaxID=1773 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="Mycobacterium tuberculosis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_441_curated_15
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15915..17276)
DNA (1362bp) protein (454aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
glmM; phosphomannomutase; K03431 phosphoglucosamine mutase [EC:5.4.2.10]
Phosphoglucosamine mutase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KFT4_9MICO
scnpilot_solids1_trim150_scaffold_441_curated_16
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(17294..17779)
DNA (486bp) protein (162aa)
30S ribosomal protein S9 n=1 Tax=Microbacterium barkeri RepID=UPI00030CA4AC
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
rpsI; ribosomal protein S9; K02996 small subunit ribosomal protein S9
scnpilot_solids1_trim150_scaffold_441_curated_17
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(17809..18255)
DNA (447bp) protein (149aa)
50S ribosomal protein L13 n=2 Tax=Microbacterium RepID=H8E4T2_9MICO
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
rplM; 50S ribosomal protein L13
scnpilot_solids1_trim150_scaffold_441_curated_18
unknown

Not on your lists

comp(18413..18643)
DNA (231bp) protein (77aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_441_curated_19
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18676..19656
DNA (981bp) protein (327aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0003662B13
Uncharacterized protein {ECO:0000313|EMBL:KJL29282.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_441_curated_20
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20063..20731)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KR29_9MICO
Contig_12, whole genome shotgun sequence {ECO:0000313|EMBL:KIP92697.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
exonuclease III
scnpilot_solids1_trim150_scaffold_441_curated_21
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20769..21611)
DNA (843bp) protein (281aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
truA; pseudouridylate synthase; K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034C8B03
scnpilot_solids1_trim150_scaffold_441_curated_22
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21667..23514
DNA (1848bp) protein (616aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000378F811
Putative acyltransferase {ECO:0000313|EMBL:GAD34978.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
yrhL; lipopolysaccharide modification acyltransferase
scnpilot_solids1_trim150_scaffold_441_curated_23
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23539..26871)
DNA (3333bp) protein (1111aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K364_9MICO
Chromosome partition protein Smc {ECO:0000313|EMBL:KJL18535.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_441_curated_24
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(26868..27668)
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003451A9E
hypothetical protein
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids1_trim150_scaffold_441_curated_25
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27661..29136)
DNA (1476bp) protein (492aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034644D1
Contig_16, whole genome shotgun sequence {ECO:0000313|EMBL:KIP91982.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_441_curated_26
unknown

Not on your lists

comp(29199..29945)
DNA (747bp) protein (249aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_441_curated_27
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30111..31250)
DNA (1140bp) protein (380aa)
Murein DD-endopeptidase MepM {ECO:0000313|EMBL:KJQ55127.1}; EC=3.4.24.- {ECO:0000313|EMBL:KJQ55127.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002E18BAC
hypothetical protein
scnpilot_solids1_trim150_scaffold_441_curated_28
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(31517..32317)
DNA (801bp) protein (267aa)
archaeal fructose-1,6-bisphosphatase; K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003459861
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids1_trim150_scaffold_441_curated_29
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32314..33417)
DNA (1104bp) protein (368aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036336E1
Uncharacterized protein {ECO:0000313|EMBL:KJL29257.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_441_curated_30
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33505..34302)
DNA (798bp) protein (266aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003486696
Enoyl-CoA hydratase {ECO:0000313|EMBL:KDA04929.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
enoyl-CoA hydratase/carnithine racemase
Displaying items 1-30 of 32 in total

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