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scnpilot_solids1_trim150_scaffold_39_curated

Search features with annotation key words

Displaying items 1-30 of 351 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_39_curated_1
unknown

Not on your lists

2..223
DNA (222bp) protein (74aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_39_curated_2
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(974..1867)
DNA (894bp) protein (298aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00036C2DE8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH88987.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
scnpilot_solids1_trim150_scaffold_39_curated_3
unknown

Not on your lists

comp(1864..2082)
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI0003753F3B
scnpilot_solids1_trim150_scaffold_39_curated_4
Arthrobacter sp. AK-YN10, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2082..2519)
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI0003819C6A
Uncharacterized protein {ECO:0000313|EMBL:ERI35209.1}; TaxID=1349820 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. AK-YN10.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_39_curated_5
Arthrobacter sp. FB24, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2529..3923)
DNA (1395bp) protein (465aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00035FE182
ATPase central domain-containing protein
AAA ATPase, central domain protein {ECO:0000313|EMBL:ABK02417.1}; TaxID=290399 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. (strain FB24).;"
scnpilot_solids1_trim150_scaffold_39_curated_6
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4287..5150)
DNA (864bp) protein (288aa)
Formyltetrahydrofolate deformylase {ECO:0000256|HAMAP-Rule:MF_01927}; EC=3.5.1.10 {ECO:0000256|HAMAP-Rule:MF_01927};; Formyl-FH(4) hydrolase {ECO:0000256|HAMAP-Rule:MF_01927}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
formyltetrahydrofolate deformylase (EC:3.5.1.10)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000344B903
scnpilot_solids1_trim150_scaffold_39_curated_7
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

5222..5677
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003463B6C
glutaminase
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids1_trim150_scaffold_39_curated_8
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5678..6391)
DNA (714bp) protein (238aa)
GMP synthase - glutamine amidotransferase domain; K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00030C5B93
Contig_15, whole genome shotgun sequence {ECO:0000313|EMBL:KIP92176.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
scnpilot_solids1_trim150_scaffold_39_curated_9
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6493..9039
DNA (2547bp) protein (849aa)
ATPase AAA n=1 Tax=Agromyces subbeticus RepID=UPI0003B65A8C
ATP-dependent Clp protease ATP-binding subunit ClpC {ECO:0000313|EMBL:KJL25374.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
ATPase with chaperone activity, ATP-binding subunit; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC
scnpilot_solids1_trim150_scaffold_39_curated_10
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9111..9827)
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002FB0B4B
Transcriptional regulator {ECO:0000313|EMBL:KDA07006.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
transcriptional regulator
scnpilot_solids1_trim150_scaffold_39_curated_11
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10025..10705)
DNA (681bp) protein (227aa)
Putative transcriptional regulator n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SM19_NOCSJ
Uncharacterized protein {ECO:0000313|EMBL:CCH77283.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
putative transcriptional regulator
scnpilot_solids1_trim150_scaffold_39_curated_12
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10796..11224
DNA (429bp) protein (143aa)
PROBABLE TRANSMEMBRANE PROTEIN n=1 Tax=Rhodococcus sp. EsD8 RepID=N1MFV8_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:KJL32409.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
DoxX family protein
scnpilot_solids1_trim150_scaffold_39_curated_13
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11408..11839
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KTT9_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EQM83434.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_39_curated_14
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11858..12265)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KEN0_9MICO
Transferase {ECO:0000313|EMBL:KDA07009.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
scnpilot_solids1_trim150_scaffold_39_curated_15
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12358..13131)
DNA (774bp) protein (258aa)
formamidopyrimidine-DNA glycosylase; K05522 endonuclease VIII [EC:3.2.2.- 4.2.99.18]
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000348E92B
DNA glycosylase {ECO:0000313|EMBL:EYT60105.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
scnpilot_solids1_trim150_scaffold_39_curated_16
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13124..13867)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KBX9_9MICO
Protein CysZ {ECO:0000313|EMBL:KJL32412.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein; K06203 CysZ protein
scnpilot_solids1_trim150_scaffold_39_curated_17
Gordonia amarae, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13959..14672
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI0003488841
Putative uncharacterized protein {ECO:0000313|EMBL:GAB05640.1}; TaxID=1075090 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia amarae NBRC 15530.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_39_curated_18
Gordonia amarae, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14686..15144
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034C3782
Putative DNA-binding protein {ECO:0000313|EMBL:GAB05639.1}; TaxID=1075090 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia amarae NBRC 15530.;"
putative DNA-binding protein
scnpilot_solids1_trim150_scaffold_39_curated_19
unknown

Not on your lists

comp(15247..15567)
DNA (321bp) protein (107aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_39_curated_20
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15595..15861)
DNA (267bp) protein (89aa)
Toxin YoeB {ECO:0000313|EMBL:KJQ53997.1}; EC=3.1.-.- {ECO:0000313|EMBL:KJQ53997.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
toxin-antitoxin system, toxin component, Txe/YoeB family n=1 Tax=Arthrobacter sp. PAO19 RepID=UPI0003B655E7
hypothetical protein
scnpilot_solids1_trim150_scaffold_39_curated_21
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15858..16106)
DNA (249bp) protein (83aa)
antitoxin n=1 Tax=Arthrobacter sp. PAO19 RepID=UPI0003B4C21E
Antitoxin {ECO:0000313|EMBL:KJC63122.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
prevent-host-death family protein
scnpilot_solids1_trim150_scaffold_39_curated_22
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16165..20772)
DNA (4608bp) protein (1536aa)
Lhr-like helicase; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-]
DEAD/DEAH box helicase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000349401F
Contig_11, whole genome shotgun sequence {ECO:0000313|EMBL:KIP92944.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
scnpilot_solids1_trim150_scaffold_39_curated_23
Arthrobacter sp. PAMC25486, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20907..23531
DNA (2625bp) protein (875aa)
Brp/Blh family beta-carotene 15,15'-monooxygenase n=1 Tax=Actinomyces sp. oral taxon 448 str. F0400 RepID=F9EEV6_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:AIY02304.1}; TaxID=1494608 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. PAMC25486.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_39_curated_24
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23582..23992
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Propionibacterium acidipropionici (strain ATCC 4875 / DSM 20272 / JCM 6432 / NBRC 12425 / NCIMB 8070) RepID=K7S651_PROA4
Uncharacterized protein {ECO:0000313|EMBL:KJL20545.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_39_curated_25
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23996..25660)
DNA (1665bp) protein (555aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KBX5_9MICO
Putative ABC transporter ATP-binding protein YheS {ECO:0000313|EMBL:KJL32417.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
ATPase components of ABC transporters with duplicated ATPase domains
scnpilot_solids1_trim150_scaffold_39_curated_26
unknown

Not on your lists

25982..26218
DNA (237bp) protein (79aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_39_curated_27
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26209..26862)
DNA (654bp) protein (218aa)
Carboxylesterase 2 {ECO:0000313|EMBL:KJL20551.1}; EC=3.1.1.1 {ECO:0000313|EMBL:KJL20551.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00036D17C8
esterase; K06999 phospholipase/carboxylesterase
scnpilot_solids1_trim150_scaffold_39_curated_28
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26930..27517
DNA (588bp) protein (196aa)
ADP-ribose pyrophosphatase n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003711C32
Uncharacterized protein {ECO:0000313|EMBL:KJL25362.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
SAM-dependent methyltransferase
scnpilot_solids1_trim150_scaffold_39_curated_29
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27685..28752)
DNA (1068bp) protein (356aa)
threonine aldolase; K01620 threonine aldolase [EC:4.1.2.5]
threonine aldolase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034BF4FB
Contig_11, whole genome shotgun sequence {ECO:0000313|EMBL:KIP92947.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
scnpilot_solids1_trim150_scaffold_39_curated_30
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28918..29571
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Arthrobacter sp. M2012083 RepID=UPI00035C8079
Uncharacterized protein {ECO:0000313|EMBL:KJL36997.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
Displaying items 1-30 of 351 in total

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