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scnpilot_solids1_trim150_scaffold_154_curated

Search features with annotation key words

Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_154_curated_1
unknown

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comp(2..70)
DNA (69bp) protein (23aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_154_curated_2
unknown

Not on your lists

139..408
DNA (270bp) protein (90aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_154_curated_3
Nitrosomonas sp. AL212, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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421..1320
DNA (900bp) protein (300aa)
alcohol sulfotransferase (EC:2.8.2.2)
Alcohol sulfotransferase {ECO:0000313|EMBL:ADZ26113.1}; EC=2.8.2.2 {ECO:0000313|EMBL:ADZ26113.1};; TaxID=153948 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. AL212.;"
Alcohol sulfotransferase n=1 Tax=Nitrosomonas sp. AL212 RepID=F9ZH16_9PROT
scnpilot_solids1_trim150_scaffold_154_curated_4
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2576..4522
DNA (1947bp) protein (649aa)
ParB-like nuclease n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y667_NITMU
ParB-like nuclease {ECO:0000313|EMBL:ABB75754.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
ParB-like nuclease; K03497 chromosome partitioning protein, ParB family
scnpilot_solids1_trim150_scaffold_154_curated_5
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4538..5458)
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y668_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB75753.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_154_curated_6
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5654..8368)
DNA (2715bp) protein (905aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI00037D45F9
Uncharacterized protein {ECO:0000313|EMBL:KGJ71229.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_154_curated_7
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8752..9444)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RQ92_ACCPU
Uncharacterized protein {ECO:0000313|EMBL:KIO48248.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_154_curated_8
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9455..9895)
DNA (441bp) protein (147aa)
RNA polymerase-binding transcription factor DksA n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K210_AZOSB
RNA polymerase-binding transcription factor DksA {ECO:0000256|HAMAP-Rule:MF_00926}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
dksA1; dnaK suppressor protein; K06204 DnaK suppressor protein
scnpilot_solids1_trim150_scaffold_154_curated_9
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9969..11231)
DNA (1263bp) protein (421aa)
Putative metal chaperone n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PCE9_9BURK
Putative metal chaperone {ECO:0000313|EMBL:ELX08483.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
cobalamin synthesis protein p47k
scnpilot_solids1_trim150_scaffold_154_curated_10
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11321..12181)
DNA (861bp) protein (287aa)
hypothetical protein n=1 Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI000382C512
Uncharacterized protein {ECO:0000313|EMBL:KIO48120.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
PEP-CTERM putative exosortase interaction domain-containing protein
scnpilot_solids1_trim150_scaffold_154_curated_11
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12328..12705
DNA (378bp) protein (126aa)
Ferric uptake regulator, Fur family n=1 Tax=Methyloversatilis universalis FAM5 RepID=F5RC88_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:KIO48119.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
ferric uptake regulator family protein; K03711 Fur family transcriptional regulator, ferric uptake regulator
scnpilot_solids1_trim150_scaffold_154_curated_12
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12822..13949)
DNA (1128bp) protein (376aa)
Rhomboid-like protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y670_NITMU
rhomboid-like protein
Rhomboid-like protein {ECO:0000313|EMBL:ABB75751.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_154_curated_13
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13993..15384
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y671_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB75750.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_154_curated_14
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15544..16581
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y675_NITMU
Uncharacterized protein {ECO:0000313|EMBL:KIO49329.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_154_curated_15
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


16677..18425
DNA (1749bp) protein (583aa)
Arginine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000255|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00123}; Short=ArgRS {ECO:0000255|HAMAP-Rule:MF_00123};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
argS; arginyl-tRNA synthetase (EC:6.1.1.19); K01887 arginyl-tRNA synthetase [EC:6.1.1.19]
Arginine--tRNA ligase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=SYR_NITMU
scnpilot_solids1_trim150_scaffold_154_curated_16
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18425..19033
DNA (609bp) protein (203aa)
Sporulation related protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y677_NITMU
sporulation related
Sporulation related protein {ECO:0000313|EMBL:ABB75744.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_154_curated_17
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19114..19752
DNA (639bp) protein (213aa)
Thiol:disulfide interchange protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y678_NITMU
DSBA oxidoreductase; K03673 thiol:disulfide interchange protein DsbA
Thiol:disulfide interchange protein {ECO:0000256|PIRNR:PIRNR001488}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_154_curated_18
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19762..20574
DNA (813bp) protein (271aa)
short chain dehydrogenase; K00540 [EC:1.-.-.-]
Short-chain dehydrogenase/reductase SDR n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y679_NITMU
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABB75742.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_154_curated_19
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20657..21133
DNA (477bp) protein (159aa)
methionine sulfoxide reductase A (EC:1.8.4.11); K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y680_NITMU
scnpilot_solids1_trim150_scaffold_154_curated_20
unknown

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comp(21056..21232)
DNA (177bp) protein (59aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_154_curated_21
unknown

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comp(21255..21494)
DNA (240bp) protein (80aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_154_curated_22
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21552..22793)
DNA (1242bp) protein (414aa)
cca; multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase (EC:2.7.7.25 2.7.7.21); K00974 tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
Multifunctional CCA protein {ECO:0000255|HAMAP-Rule:MF_01261}; Includes:; CCA-adding enzyme {ECO:0000255|HAMAP-Rule:MF_01261}; EC=2.7.7.72 {ECO:0000255|HAMAP-Rule:MF_01261};; CCA tRNA nucleotidyltransferase {ECO:0000255|HAMAP-Rule:MF_01261}; tRNA CCA-pyrophosphorylase {ECO:0000255|HAMAP-Rule:MF_01261}; tRNA adenylyl-/cytidylyl-transferase {ECO:0000255|HAMAP-Rule:MF_01261}; tRNA nucleotidyltransferase {ECO:0000255|HAMAP-Rule:MF_01261}; tRNA-NT {ECO:0000255|HAMAP-Rule:MF_01261}; Includes:; 2'-nucleotidase {EC
Multifunctional CCA protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=CCA_NITMU
scnpilot_solids1_trim150_scaffold_154_curated_23
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22804..23742)
DNA (939bp) protein (313aa)
NAD-dependent epimerase/dehydratase; K00329 NADH dehydrogenase [EC:1.6.5.3]; K00356 NADH dehydrogenase [EC:1.6.99.3]
NAD-dependent epimerase/dehydratase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y682_NITMU
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ABB75739.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_154_curated_24
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23754..25688)
DNA (1935bp) protein (645aa)
lytic transglycosylase catalytic subunit; K08309 soluble lytic murein transglycosylase [EC:3.2.1.-]
Lytic transglycosylase, catalytic n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y683_NITMU
Lytic transglycosylase, catalytic {ECO:0000313|EMBL:ABB75738.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_154_curated_25
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25825..27189
DNA (1365bp) protein (455aa)
aldehyde dehydrogenase; K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16]
Aldehyde dehydrogenase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y684_NITMU
Aldehyde dehydrogenase {ECO:0000313|EMBL:ABB75737.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_154_curated_26
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27294..28637)
DNA (1344bp) protein (448aa)
glutamate dehydrogenase (EC:1.4.1.4); K00262 glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
Glutamate dehydrogenase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y685_NITMU
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_154_curated_27
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28863..28985)
DNA (123bp) protein (41aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DWV2_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU63715.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
scnpilot_solids1_trim150_scaffold_154_curated_28
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29080..30273
DNA (1194bp) protein (398aa)
MltA; K08304 membrane-bound lytic murein transglycosylase A [EC:3.2.1.-]
MltA n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y686_NITMU
MltA {ECO:0000313|EMBL:ABB75735.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_154_curated_29
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30325..31044)
DNA (720bp) protein (240aa)
putative thiol:disulfide interchange protein; K03981 thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
Putative thiol:disulfide interchange protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y687_NITMU
Putative thiol:disulfide interchange protein {ECO:0000313|EMBL:ABB75734.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_154_curated_30
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31130..32299)
DNA (1170bp) protein (390aa)
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase {ECO:0000313|EMBL:ABB75733.1}; EC=1.14.13.- {ECO:0000313|EMBL:ABB75733.1};; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y688_NITMU
ubiquinone biosynthesis hydroxylase family protein
Displaying items 1-30 of 69 in total

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