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scnpilot_solids1_trim150_scaffold_145_curated

Search features with annotation key words

Displaying items 31-60 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_145_curated_31
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31771..32148)
DNA (378bp) protein (126aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
alkylhydroperoxidase n=1 Tax=Dyella ginsengisoli RepID=UPI00034BED1D
alkylhydroperoxidase AhpD family core domain protein
scnpilot_solids1_trim150_scaffold_145_curated_32
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32145..32411)
DNA (267bp) protein (89aa)
Glutaredoxin, GrxC family protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WES6_9GAMM
Glutaredoxin, GrxC family protein {ECO:0000313|EMBL:EIL97967.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Glutaredoxin, GrxC family
scnpilot_solids1_trim150_scaffold_145_curated_33
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32538..34160
DNA (1623bp) protein (541aa)
Putative beta-barrel assembly-enhancing protease {ECO:0000256|HAMAP-Rule:MF_00997}; EC=3.4.-.- {ECO:0000256|HAMAP-Rule:MF_00997};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Putative Zn-dependent protease n=1 Tax=Rhodanobacter denitrificans RepID=M4NPY7_9GAMM
putative Zn-dependent protease
scnpilot_solids1_trim150_scaffold_145_curated_34
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34254..36362
DNA (2109bp) protein (703aa)
Putative membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NFI3_9GAMM
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AGG88373.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_145_curated_35
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36416..36952
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NKS7_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88371.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_145_curated_36
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37153..38139)
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NMJ0_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88916.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_145_curated_37
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38142..38774)
DNA (633bp) protein (211aa)
Lysine exporter protein LysE/YggA n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W606_9GAMM
Lysine exporter protein LysE/YggA {ECO:0000313|EMBL:EIL94897.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
lysine exporter protein LysE/YggA
scnpilot_solids1_trim150_scaffold_145_curated_38
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38869..39828
DNA (960bp) protein (320aa)
Putative transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W608_9GAMM
Putative transcriptional regulator {ECO:0000313|EMBL:EIL94899.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_145_curated_39
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(39903..41390)
DNA (1488bp) protein (496aa)
Endoribonuclease L-PSP n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CWP5_TRURR
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:ADI14444.1}; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;"
scnpilot_solids1_trim150_scaffold_145_curated_40
gamma proteobacterium NOR5-3, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41390..42874)
DNA (1485bp) protein (495aa)
Putative amino acid transporter n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KPS5_9GAMM
Putative amino acid transporter {ECO:0000313|EMBL:EED30444.1}; TaxID=566466 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium NOR5-3.;"
amino acid permease
scnpilot_solids1_trim150_scaffold_145_curated_41
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42993..44363)
DNA (1371bp) protein (457aa)
Kynurenine 3-monooxygenase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WP91_9GAMM
2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase {ECO:0000313|EMBL:EIM01283.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase
scnpilot_solids1_trim150_scaffold_145_curated_42
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44367..45656)
DNA (1290bp) protein (430aa)
Kynureninase {ECO:0000256|HAMAP-Rule:MF_01970, ECO:0000256|PIRNR:PIRNR038800}; EC=3.7.1.3 {ECO:0000256|HAMAP-Rule:MF_01970, ECO:0000256|PIRNR:PIRNR038800};; L-kynurenine hydrolase {ECO:0000256|HAMAP-Rule:MF_01970}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
Kynureninase (EC:3.7.1.3)
kynureninase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B6CB5B
scnpilot_solids1_trim150_scaffold_145_curated_43
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45748..46773)
DNA (1026bp) protein (342aa)
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase n=1 Tax=Rhodanobacter denitrificans RepID=I4WTP3_9GAMM
putative TIM-barrel fold metal-dependent hydrolase
Putative TIM-barrel fold metal-dependent hydrolase {ECO:0000313|EMBL:AGG88372.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_145_curated_44
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46822..47337)
DNA (516bp) protein (172aa)
3-hydroxyanthranilate 3,4-dioxygenase {ECO:0000256|HAMAP-Rule:MF_00825}; EC=1.13.11.6 {ECO:0000256|HAMAP-Rule:MF_00825};; 3-hydroxyanthranilate oxygenase {ECO:0000256|HAMAP-Rule:MF_00825}; 3-hydroxyanthranilic acid dioxygenase {ECO:0000256|HAMAP-Rule:MF_00825}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
3-hydroxyanthranilate 3,4-dioxygenase (EC:1.13.11.6)
3-hydroxyanthranilate 3,4-dioxygenase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WQK4_9GAMM
scnpilot_solids1_trim150_scaffold_145_curated_45
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47413..48861)
DNA (1449bp) protein (483aa)
2-aminomuconic semialdehyde dehydrogenase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WKV5_9GAMM
2-aminomuconic semialdehyde dehydrogenase {ECO:0000313|EMBL:EIM00097.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
NAD-dependent aldehyde dehydrogenase
scnpilot_solids1_trim150_scaffold_145_curated_46
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48927..49715)
DNA (789bp) protein (263aa)
Short-chain dehydrogenase/reductase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VNA1_9GAMM
Short-chain dehydrogenase/reductase {ECO:0000313|EMBL:EIL88692.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
scnpilot_solids1_trim150_scaffold_145_curated_47
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49871..50311
DNA (441bp) protein (147aa)
2-aminomuconate deaminase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B5F465
Uncharacterized protein {ECO:0000313|EMBL:KFN50906.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
putative translation initiation inhibitor, yjgF family
scnpilot_solids1_trim150_scaffold_145_curated_48
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50357..50872)
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Marinobacterium rhizophilum RepID=UPI00037E332F
Uncharacterized protein {ECO:0000313|EMBL:KGM56302.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_145_curated_49
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50926..52053)
DNA (1128bp) protein (376aa)
Aspartate/tyrosine/aromatic aminotransferase n=1 Tax=Caulobacter sp. AP07 RepID=J3ANP4_9CAUL
class I/II aminotransferase
Aspartate/tyrosine/aromatic aminotransferase {ECO:0000313|EMBL:EJL34776.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
scnpilot_solids1_trim150_scaffold_145_curated_50
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52101..53396)
DNA (1296bp) protein (432aa)
Argininosuccinate lyase n=1 Tax=Rhodanobacter denitrificans RepID=M4NCI6_9GAMM
Argininosuccinate lyase {ECO:0000313|EMBL:AHX12493.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
argininosuccinate lyase
scnpilot_solids1_trim150_scaffold_145_curated_51
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53440..54429)
DNA (990bp) protein (330aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|SAAS:SAAS00137393}; EC=1.2.1.38 {ECO:0000256|SAAS:SAAS00137393};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5V2_9GAMM
scnpilot_solids1_trim150_scaffold_145_curated_52
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54426..55856)
DNA (1431bp) protein (477aa)
Acetylglutamate kinase {ECO:0000313|EMBL:AHX12491.1}; EC=2.7.2.8 {ECO:0000313|EMBL:AHX12491.1};; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
N-acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VNQ4_9GAMM
scnpilot_solids1_trim150_scaffold_145_curated_53
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55843..56976)
DNA (1134bp) protein (378aa)
Acetylornithine deacetylase {ECO:0000313|EMBL:EIL94841.1}; EC=3.5.1.16 {ECO:0000313|EMBL:EIL94841.1};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase (EC:3.5.1.-)
Acetylornithine deacetylase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5V0_9GAMM
scnpilot_solids1_trim150_scaffold_145_curated_54
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56973..58166)
DNA (1194bp) protein (398aa)
Argininosuccinate synthase {ECO:0000256|SAAS:SAAS00214603}; EC=6.3.4.5 {ECO:0000256|SAAS:SAAS00009947};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQ39_9GAMM
scnpilot_solids1_trim150_scaffold_145_curated_55
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58196..58672)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQ38_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM01580.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative redox protein, regulator of disulfide bond formation
scnpilot_solids1_trim150_scaffold_145_curated_56
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58724..59728)
DNA (1005bp) protein (335aa)
N-acetylornithine carbamoyltransferase {ECO:0000313|EMBL:EIM03502.1}; EC=2.1.3.9 {ECO:0000313|EMBL:EIM03502.1};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
ornithine carbamoyltransferase (EC:2.1.3.9)
N-acetylornithine carbamoyltransferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WVL0_9GAMM
scnpilot_solids1_trim150_scaffold_145_curated_57
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60142..60675)
DNA (534bp) protein (178aa)
Putative outer membrane lipoprotein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQ35_9GAMM
Putative outer membrane lipoprotein {ECO:0000313|EMBL:EIM01577.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative outer membrane lipoprotein
scnpilot_solids1_trim150_scaffold_145_curated_58
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60835..62205
DNA (1371bp) protein (457aa)
cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Cysteine--tRNA ligase n=1 Tax=Rhodanobacter denitrificans RepID=I4WTM6_9GAMM
scnpilot_solids1_trim150_scaffold_145_curated_59
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62288..62719
DNA (432bp) protein (144aa)
SufE protein probably involved in Fe-S center assembly n=1 Tax=Rhodanobacter denitrificans RepID=M4NCI1_9GAMM
SufE protein probably involved in Fe-S center assembly
SufE protein probably involved in Fe-S center assembly {ECO:0000313|EMBL:AGG88354.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_145_curated_60
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62894..64189)
DNA (1296bp) protein (432aa)
RNA polymerase-binding protein DksA n=2 Tax=Rhodanobacter denitrificans RepID=M4NEI0_9GAMM
RNA polymerase-binding protein DksA
RNA polymerase-binding protein DksA {ECO:0000313|EMBL:AGG88352.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying items 31-60 of 73 in total

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