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scnpilot_solids1_trim150_scaffold_145_curated

Search features with annotation key words

Displaying items 61-73 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_145_curated_61
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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64550..65887
DNA (1338bp) protein (446aa)
dihydroorotase, multifunctional complex type; K01465 dihydroorotase [EC:3.5.2.3]
dihydroorotase n=1 Tax=Dyella japonica RepID=UPI0002DF1F4E
Dihydroorotase {ECO:0000256|SAAS:SAAS00252556}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
scnpilot_solids1_trim150_scaffold_145_curated_62
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(65907..66833)
DNA (927bp) protein (309aa)
GTP cyclohydrolase FolE2 {ECO:0000256|HAMAP-Rule:MF_01527}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_01527};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
GTP cyclohydrolase I (EC:3.5.4.16)
GTP cyclohydrolase FolE2 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5U0_9GAMM
scnpilot_solids1_trim150_scaffold_145_curated_63
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(66903..67829)
DNA (927bp) protein (309aa)
Phytoene/squalene synthetase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5T9_9GAMM
Phytoene/squalene synthetase {ECO:0000313|EMBL:EIL94830.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
phytoene/squalene synthetase
scnpilot_solids1_trim150_scaffold_145_curated_64
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(67826..68512)
DNA (687bp) protein (229aa)
Phosphoglycolate phosphatase {ECO:0000256|SAAS:SAAS00077902}; EC=3.1.3.18 {ECO:0000256|SAAS:SAAS00077902};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Phosphoglycolate phosphatase n=1 Tax=Rhodanobacter denitrificans RepID=I4WTL9_9GAMM
2-phosphoglycolate phosphatase
scnpilot_solids1_trim150_scaffold_145_curated_65
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(68509..69216)
DNA (708bp) protein (236aa)
3-demethylubiquinone-9 3-methyltransferase (EC:2.1.1.64)
Ubiquinone biosynthesis O-methyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQC8_9GAMM
Ubiquinone biosynthesis O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00472, ECO:0000256|SAAS:SAAS00063564}; 2-polyprenyl-6-hydroxyphenol methylase {ECO:0000256|HAMAP-Rule:MF_00472}; 3-demethylubiquinone 3-O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00472}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids1_trim150_scaffold_145_curated_66
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(69304..70635)
DNA (1332bp) protein (444aa)
Cytosine deaminase-like metal-dependent hydrolase n=1 Tax=Rhodanobacter denitrificans RepID=M4NCE1_9GAMM
cytosine deaminase-like metal-dependent hydrolase
Cytosine deaminase-like metal-dependent hydrolase {ECO:0000313|EMBL:AGG88345.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_145_curated_67
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(70721..71287)
DNA (567bp) protein (189aa)
Elongation factor P n=1 Tax=Rhodanobacter denitrificans RepID=I4WTL5_9GAMM
translation elongation factor P
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_145_curated_68
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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71392..72414
DNA (1023bp) protein (341aa)
L-lysine 2,3-aminomutase (EC:5.4.3.2)
Lysine-2,3-aminomutase-related protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WTL4_9GAMM
Lysine-2,3-aminomutase-related protein {ECO:0000313|EMBL:EIM01666.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids1_trim150_scaffold_145_curated_69
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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72549..74609
DNA (2061bp) protein (687aa)
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NEH3_9GAMM
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:AGG88342.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein
scnpilot_solids1_trim150_scaffold_145_curated_70
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(74771..75166)
DNA (396bp) protein (132aa)
50S ribosomal protein L19 n=1 Tax=Rhodanobacter denitrificans RepID=I4WTL2_9GAMM
ribosomal protein L19
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_145_curated_71
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(75378..76136)
DNA (759bp) protein (253aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WTL1_9GAMM
tRNA (guanine-N1)-methyltransferase
scnpilot_solids1_trim150_scaffold_145_curated_72
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(76170..76682)
DNA (513bp) protein (171aa)
Ribosome maturation factor RimM n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQC0_9GAMM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
16S rRNA processing protein RimM
scnpilot_solids1_trim150_scaffold_145_curated_73
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(76687..76932)
DNA (246bp) protein (82aa)
30S ribosomal protein S16 n=1 Tax=Rhodanobacter sp. 115 RepID=I4VQS4_9GAMM
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
SSU ribosomal protein S16P
Displaying items 61-73 of 73 in total

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