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scnpilot_solids1_trim150_scaffold_74_curated_90

Organism: solids_Rhodanobacter_4

partial RP 24 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 9 / 38
Location: comp(114319..115215)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3K8_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 88.9
  • Coverage: 296.0
  • Bit_score: 524
  • Evalue 5.80e-146
LysR family transcriptional regulator {ECO:0000313|EMBL:EIL94049.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.9
  • Coverage: 296.0
  • Bit_score: 524
  • Evalue 8.10e-146
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 88.4
  • Coverage: 294.0
  • Bit_score: 519
  • Evalue 5.90e-145

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 897
ATGCACGTGCTCGACAACGTCACCATCAACCAGCTGCGTGCGTTCGTCGCGGTATGCGACCAGGGAAGCTTCTCGGGTGCGGCGCGGCAGCTGCGACGCGCGCAGTCGGCCATCAGCCACGCAATCAAGGCGCTGGAAAGCGCGTTCGATGTCGAACTGTTCGAGCGCAACACGCGCAAGGCGCAGCTCACCGCGGCGGGGCGCAGCCTCTTGCCAGACGCTCGGGCGGTCATCTCACGCACGGAAGAAATGAAGAACCGCGCCGGTGCGATCGCCAAGGCCGGGGTGCCGCAGGTTTCGGTGGCGGTCGATGCCTACTTCCCGCGCGCCCACCTGATCGACTGCCTGCGGACGCTGCAGGAGGAGTTCCCCACCGCAGCGATCAATCTGCGGATCACGACCATGCAGGGCGGCGAGAACCTGGTGCTCGAAAGGGTGTGTGCCTTGGCCGTCACGATCGCGGACGTGCCGGAGGTGAACCCGGATGCCGTGGAACGGCACTGGCTGGGCGAGGCGAAGATGGTGACGGTGTGTGCTCCATCCCATCCGCTCGCGTCGACACCGAAACCCATCGCCAAGGACGAGTTTGGCCGACATGTCCAGATCGTCGTCACTGACAACCAACGCGGCGCCGAGAAGACCCAAACCGGGGTTGCCGGCAAGCGCCAGTGGCTGGTCAACGATCTCGGCGCCAAGCGCGACCTGCTCAAGGCCGGTCTCGGCTGGGGACACCTGCCGCGCCACCTGGTCGCCGAGGATCTGGCCAGCGGACAGCTCATCGAACTCGAACGCCGCGCCTGGCACATGCGCCCGCTGACCTTCGTGGTCTCGCAGCGGCGTGGTCACGATCTCTCACCATGCGAATCGCGGCTGGTGGAGATTCTTGGCGAGGCTTAG
PROTEIN sequence
Length: 299
MHVLDNVTINQLRAFVAVCDQGSFSGAARQLRRAQSAISHAIKALESAFDVELFERNTRKAQLTAAGRSLLPDARAVISRTEEMKNRAGAIAKAGVPQVSVAVDAYFPRAHLIDCLRTLQEEFPTAAINLRITTMQGGENLVLERVCALAVTIADVPEVNPDAVERHWLGEAKMVTVCAPSHPLASTPKPIAKDEFGRHVQIVVTDNQRGAEKTQTGVAGKRQWLVNDLGAKRDLLKAGLGWGHLPRHLVAEDLASGQLIELERRAWHMRPLTFVVSQRRGHDLSPCESRLVEILGEA*