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scnpilot_solids1_trim150_scaffold_106_curated_72

Organism: solids_Rhodanobacter_4

partial RP 24 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 9 / 38
Location: comp(88115..89407)

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.3
  • Coverage: 430.0
  • Bit_score: 594
  • Evalue 9.20e-167
Diaminopimelate decarboxylase n=1 Tax=Rhodanobacter denitrificans RepID=M4NHS6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 72.8
  • Coverage: 423.0
  • Bit_score: 591
  • Evalue 9.50e-166
diaminopimelate decarboxylase similarity KEGG
DB: KEGG
  • Identity: 72.8
  • Coverage: 423.0
  • Bit_score: 591
  • Evalue 3.00e-166

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Taxonomy

Lysobacter concretionis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1293
ATGAGCGAGCTTGTCGAGGCCACAGTCGAGGCCACAGCCGCCACCACCGCCATCGGCACTTTCGACGGGGTCGACCTGGAACGCCTGGCGAAGCAGATCCCCACGCCGTTCTACGCCTACTCGGCGAGCGCCATCCGCGAGCGCATCCGCGGGCTGCAGGACGCGCTGCAAGGCCTGGACGCACTGATCTGCTTCGCCGTGAAAGCCAACAGCAATCGCGCCATCCTGCAGCTGATGCGTGACGCCGGGGTTGGCGCCGACACCGTTTCCGGCGGCGAATTGTGGCGCTGCCTGCAGGCCGGCATGCCGCCCGAACGCATCGTATTTTCCGGCGTGGGCAAGACCGGCGACGAGATTGCCGAGGCCTTGCGCGCCGGCATCCTGCATCTCAACGTCGAGTCCTTCGGCGAGTTGCAACTGCTGCAGCAGGTGGCGCAGGCGCAGGGCGCCATCGCGCATGTGGCCGTCCGTATCAATCCGGACGTCGATGCCCACACCCACGAAAAGATCTCCACCGGCAAGGCGGAGAACAAGTTCGGGGTGAGCATCGATGAGGCGCGGCGCTGGTTTGCGCAGGCCGCGTCATTTCCGAATGTCAGGCTGAATGGCCTGCATGTGCACATCGGCTCGCAAATCTTGAGCGTCGAGCCGTTCCGCCAGGCCTTGCAGCGCGTCGCGACGTTCTGGCGCGAGCTGGCAGCCGATGGGCACGTGCTCAGCAGCATCGACACCGGCGGTGGACTCGGCGTGTGCTATCGCGCCGGCCACGACCACCCGGTGGCGCCAGCCGACTATGTCGGCGTAATCCGCGAGACGCTGGCGGATTTCCACGGCCAGATCCTGCTCGAACCGGGCCGCTACCTGGTGGCCGAGGCCGGCGTCCTGGTGACCAGCGTCATCCGCGTCAAGCGCGGCGACGAGCGCCAGTTCCTGGTGCTGGATTCGGCAATGAACGACCTGGTGCGCCCCAGCCTGTACGACGCCTGGCACGACATCGTGCCGCTGGCACACGGCGACCGCACTCCCACCACGTATGACATCGTCGGCCCGGTGTGCGAAACCGGCGACACGTTTGCGCGCGGCCGCGAATTGCCGGAATGCCGCGCCGGCGACTTGCTCATGATCAAGTCCGCAGGCGCGTATGGCGCGTCCATGTCCTCGACCTACAACTCACGGCCGCTGGCTGCCGAGGTGCTGCTGGACCGCGGCCGCTACGCCATCATCCGGCGCCGCCAGAACCGCGAGGGCATGGTCGCCGACGAGCTCGCCGCCGACCACTGGCAAACCGCCTGA
PROTEIN sequence
Length: 431
MSELVEATVEATAATTAIGTFDGVDLERLAKQIPTPFYAYSASAIRERIRGLQDALQGLDALICFAVKANSNRAILQLMRDAGVGADTVSGGELWRCLQAGMPPERIVFSGVGKTGDEIAEALRAGILHLNVESFGELQLLQQVAQAQGAIAHVAVRINPDVDAHTHEKISTGKAENKFGVSIDEARRWFAQAASFPNVRLNGLHVHIGSQILSVEPFRQALQRVATFWRELAADGHVLSSIDTGGGLGVCYRAGHDHPVAPADYVGVIRETLADFHGQILLEPGRYLVAEAGVLVTSVIRVKRGDERQFLVLDSAMNDLVRPSLYDAWHDIVPLAHGDRTPTTYDIVGPVCETGDTFARGRELPECRAGDLLMIKSAGAYGASMSSTYNSRPLAAEVLLDRGRYAIIRRRQNREGMVADELAADHWQTA*