ggKbase home page

scnpilot_solids1_trim150_scaffold_106_curated_73

Organism: solids_Rhodanobacter_4

partial RP 24 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 9 / 38
Location: 89820..92654

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane cobalamin receptor protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFT1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 54.6
  • Coverage: 955.0
  • Bit_score: 1042
  • Evalue 0.0
Outer membrane cobalamin receptor protein {ECO:0000313|EMBL:EIL98322.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.6
  • Coverage: 955.0
  • Bit_score: 1042
  • Evalue 0.0
outer membrane receptor for ferrienterochelin and colicins similarity KEGG
DB: KEGG
  • Identity: 53.5
  • Coverage: 962.0
  • Bit_score: 1034
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2835
ATGAAATATGCCAGCACAGGTTTGTGTATAGCCGTCCGGGTGGCTTTGGCTGCCGGTGTCTTCAGCGTGGCTGCCGGCGTCGCCCAGGCCCAGGATGCGACCGCGGACCAAACCGCGTCGACGGGGCAATCGGCAGCAACGGAAGCCCAGAACCTGAAAGGTGTGGTCGTGACCGGTTCGTTGATCCGGCGCGTGGACATCGAAACCGCCAGCCCGGTGATCACTATCGGGCGACAGCACATCGACGACTCGGGATCGGTAACGCTAGGGAGCGTCTTGCAGGAATTGCCGAGCATCGCCGGCAATGCGATCAATCCGCAGGTCACCGGTAATGGCGGTGGTGTCGCCAACGCCACCACCGAAGGTGGATCGGGTGCATCCAAACTCTCCCTGCGCGGTCTCGGCGACGGCCGCACGCTGGTCTTGATCAATGGCCAGCGCCTGGTGAATTCAGATATCAACTTGATTCCACAAGAGATGGTTTCCCAGGTCGACGCATTGGCGGAGGGAGCAACCACCACGTACGGCTCGGATGCCATCGGTGGTGTCGTCAACATCCTCACCAGAGACAATTTCAACGGTGCCCAGGTGTCCGTGAGCGACGGCATCTCTGGTCACGGTGATGCCAAGCGCAAAAGTGCGTCCCTTGTACTTGGTCACAGTGGCGACAAGTACCGCGTGGAAGGCGGCGTTGGAATCAATAAGACAGGTACCGCTATAGGAACCAACCGCGACTTCTCGCGCACCTCGTATTCGCTGCGAAACGGGGTGATTACCCCATCAAGCGCATCCACCTTCGTACCGAACATGAGGATCCAGTTGCCTGCCAACTTGGCGAACCAGTTCGGATGTCCGTATGTCACCTTGGCAAAACCGGATGGGTCCCAGTTGGGCGACTACGAATGCTTTTCCAATACGAAATCCACTTACAACGAATTTCCGAAATACAATTATCTGCAGACGAAATCGCTGCGACGCAATGGCTTCTTCATTGGTAGCTACGACTTTACACCGAATATCACGGGCTTCGTCAACGCGTTCTACGTGTCAACGACCTCTTCCGGGCTCAATGCTCCCGATCCCACGTATACGGTGGACGGCTGGTCGGTTCCAGCCAGCGCTCCCTATAACCCGTTCGGGGTGACGTTCAGCGGCGGAGTCATACCTGGAGATCCGAACAGCGGTTACGAGATCCGTACACGTGTTGCCGGAAACGACGCCCGTGTAAATTATTATGATACCGAAACGGAACAGATCATTACCGGATTACGCGGAGGTTTCGGCGACAGCAGTTGGCTTTGGAATGCGACCCTGAACTATGGTCATTCCGAGCGCAACCAGACCAACGAGAACGAAATCCTGGTTTCCGGCTTGCAAAATGTCATCAACACCAGCAATTTCTTCAATCATGCCAATGTTGCCGGAAGTCTCGCGGGTGGGCTGGCGGATCCGACATACAGCCGGTACGACAACCTGCGGCAGATCGAGCTGACTACGAACGGCAACCTGTGGCAATTGCCGGCCGGCACCATGCAGGCATCGGTTGGGACGTTGTACCGCAGCGAAGCGTACAATTTCACCGTTCCGGACATCGTGCTGCTTGATACTGCGACCCTGACGTGCCAGACCGTGCAGGAAGCGTGTGCTTCGCCTGGTCGAGGCAGCGACAGCGTCAAGGAAGTTTTTGCCGAGACCCTGATTCCCGTGCTCGCCGATCTTCCTGGCGTGCACTCGCTGGACGTTGACCTCGGTATCCGCACGTCCAAGTACGATTCGCTCAAGAGCGCCACGACGAACAAGAAGGTTGCGATTCAATGGCGGCCGATCAAGAATCTTCTTGTGCGAGGGACCATTTCCGAAGTCTTTCGTGCGCCGAACCTCAGCATGCTTTACGACGGGCCTTCCCTCTCGCAACCTGGGTTCGTCGACCCTTGCGCTGCCCTGACGGCCGCGGAGCTTGGTCAACACGCCGCTGCGTGCAAGTACGTTCCGCCAAATTTTGACGCCACCGACGAAGCCCAGGTCAATGCACTCGGCGTGGGTTCAAAGAGGGTAAACGCCAACCTCAAGCCGGAGCATGGAAAGTCCGTTGACCTTGGCCTGGTGTACGCCCCCGGCTGGGGTCCAGGCATCAATACAAGCATCGACTTCTGGCATGTTTATCTCTACGACACGCTGGTGAATATTTCGCCAACCACGATTGTCAACCAGTGCTTCAATAATAATGACAGTCAATATTGCCCGCTCATCCTCAGGTATGATGACACCACAAGGAACCCAGGCAAGATTTACCAGGTGAACGCACCGACGGTAAATCTGGGTAGTTTGAGCACCAGCGGCATCGACGCGACATTCAACTATGACATTCCGCATTTCAATCTCGGTAGCGTCGACCCAGGTAATTTCCGCCTTGAGCTCAAGGGCACTTACGTTTCCACGTTCAACAATAGTCCGACGCCGGGCGCCCCCGGCGCTGCCGTGTCGAAGTATGCCGGGACGTTCAACTCCCAATTCGGGAACATCGCACGATTGCGGGGAAGCGGTACCATCAACTGGAACCGCGGCAATTGGAGCGCCCAGTGGAGGAGCCGCTACATCAGCTCGGTCGAGTCCTTGAATGCTGACTCGGTGACCGGTGCAAGTTTCCAGTTGGCGTCGGTCGCATACCATTCGCTCCAGGTTGGTTATGCAGTCCCGGCAATCCATACGCGGTTTTCGGTGGGTATCGACAATATATCCGATAGGCAACCACCGTTTGCGCCGGGCGGCCGGGGCAACCAGTATGACGTCATTGGCCGGTATTACTGGGCGCAAGCAACGGTAAAGCTGTTCTGA
PROTEIN sequence
Length: 945
MKYASTGLCIAVRVALAAGVFSVAAGVAQAQDATADQTASTGQSAATEAQNLKGVVVTGSLIRRVDIETASPVITIGRQHIDDSGSVTLGSVLQELPSIAGNAINPQVTGNGGGVANATTEGGSGASKLSLRGLGDGRTLVLINGQRLVNSDINLIPQEMVSQVDALAEGATTTYGSDAIGGVVNILTRDNFNGAQVSVSDGISGHGDAKRKSASLVLGHSGDKYRVEGGVGINKTGTAIGTNRDFSRTSYSLRNGVITPSSASTFVPNMRIQLPANLANQFGCPYVTLAKPDGSQLGDYECFSNTKSTYNEFPKYNYLQTKSLRRNGFFIGSYDFTPNITGFVNAFYVSTTSSGLNAPDPTYTVDGWSVPASAPYNPFGVTFSGGVIPGDPNSGYEIRTRVAGNDARVNYYDTETEQIITGLRGGFGDSSWLWNATLNYGHSERNQTNENEILVSGLQNVINTSNFFNHANVAGSLAGGLADPTYSRYDNLRQIELTTNGNLWQLPAGTMQASVGTLYRSEAYNFTVPDIVLLDTATLTCQTVQEACASPGRGSDSVKEVFAETLIPVLADLPGVHSLDVDLGIRTSKYDSLKSATTNKKVAIQWRPIKNLLVRGTISEVFRAPNLSMLYDGPSLSQPGFVDPCAALTAAELGQHAAACKYVPPNFDATDEAQVNALGVGSKRVNANLKPEHGKSVDLGLVYAPGWGPGINTSIDFWHVYLYDTLVNISPTTIVNQCFNNNDSQYCPLILRYDDTTRNPGKIYQVNAPTVNLGSLSTSGIDATFNYDIPHFNLGSVDPGNFRLELKGTYVSTFNNSPTPGAPGAAVSKYAGTFNSQFGNIARLRGSGTINWNRGNWSAQWRSRYISSVESLNADSVTGASFQLASVAYHSLQVGYAVPAIHTRFSVGIDNISDRQPPFAPGGRGNQYDVIGRYYWAQATVKLF*