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scnpilot_solids1_trim150_scaffold_102_curated_23

Organism: solids_Rhodanobacter_4

partial RP 24 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 9 / 38
Location: 27238..27861

Top 3 Functional Annotations

Value Algorithm Source
Polysaccharide export protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRS8_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 81.2
  • Coverage: 207.0
  • Bit_score: 337
  • Evalue 1.20e-89
Polysaccharide export protein {ECO:0000313|EMBL:EIM02170.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.2
  • Coverage: 207.0
  • Bit_score: 337
  • Evalue 1.70e-89
periplasmic protein involved in polysaccharide export similarity KEGG
DB: KEGG
  • Identity: 79.8
  • Coverage: 208.0
  • Bit_score: 323
  • Evalue 5.60e-86

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 624
GTGAAGCTGCCACCACGAAATTATGTCGTCTGGCTGATGATGATGGCCGTCTTGTTGCTGATTGGCGGTTGCAGTACGACACCCGCAATCAATGGCTCGACGGCGACGACACCGCCGACGGAGCGCTACATCATCGGACCGGGCGATTCGCTGGACATCTTTGTACGCGACAACCCCACCCTGAGCACCACGGTGCCGGTTCGTCCCGACGGGCGCATCTCGATTCCGTTGGTGCAGTCGATCGTTGCAGCCGGCAAGACTCCGGACGAATTGGCTGCCGATCTGGAAAAGGAGTTGGGCCGCTACATCCGTGAGCCGCTGGTGACTGTCATCGTCAAGAGCTTCGTGGGTGCCTACAGCCAGCAGGTCCGCGTGGTCGGGCAGGCGGCGACACCCAAGGCTGTGCCCTATCGCAGCGGCATGACCGTACTCGACGTGATGATCGAGGTCGGCGGCCTCACCAAGTTCGCCGCCGGCAACAACGCGAAAATCATTCGGCGCCTGCCCGACGGCAAAGAGCAGACCATCCCCGTGCGGCTCGGTGATCTGATGAATGGCACGATCAAGTACAACGTCGTCATGCAGCCCGGGGATATTCTCATCATCCCTCAATCGTTGTTTTGA
PROTEIN sequence
Length: 208
VKLPPRNYVVWLMMMAVLLLIGGCSTTPAINGSTATTPPTERYIIGPGDSLDIFVRDNPTLSTTVPVRPDGRISIPLVQSIVAAGKTPDELAADLEKELGRYIREPLVTVIVKSFVGAYSQQVRVVGQAATPKAVPYRSGMTVLDVMIEVGGLTKFAAGNNAKIIRRLPDGKEQTIPVRLGDLMNGTIKYNVVMQPGDILIIPQSLF*