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scnpilot_solids1_trim150_scaffold_362_curated_15

Organism: solids_Rhodanobacter_4

partial RP 24 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 9 / 38
Location: 12917..14833

Top 3 Functional Annotations

Value Algorithm Source
DNA/RNA helicase, superfamily II (EC:5.99.1.-) similarity KEGG
DB: KEGG
  • Identity: 77.5
  • Coverage: 641.0
  • Bit_score: 950
  • Evalue 2.20e-274
ATP-dependent RNA helicase DeaD {ECO:0000256|HAMAP-Rule:MF_00964}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00964};; Cold-shock DEAD box protein A {ECO:0000256|HAMAP-Rule:MF_00964}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.5
  • Coverage: 641.0
  • Bit_score: 950
  • Evalue 9.80e-274
ATP-dependent RNA helicase DeaD n=1 Tax=Rhodanobacter denitrificans RepID=M4NKK8_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 77.5
  • Coverage: 641.0
  • Bit_score: 950
  • Evalue 7.00e-274

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1917
ATGTCCGCCCCCGCCCCCGATGACGCCCCGGCGCAAGCCGTCATTGGCGTGCCGGCACCCGCCGGCTTCACCACGTTTGGCCTGCATCCCGACGTGCTCGCGGTACTGGCCGAGGTGGGTTATGAGTCCCCCTCGCCGATCCAGGCCGCCACCATCCCGCCGCTGCTGGCGGGTCGTGACGTGCTCGGCACCGCGCAAACCGGCACCGGCAAGACCGCGGCGTTCGCTTTGCCCATCCTGTCCCTGCTGGATCGCCGCCCGGGCAAACCGCAGGCCCTGGTGCTGGCCCCTACGCGCGAGCTGGCGATCCAGGTTGCCGAGGCCTTCCAGCGCTATGCCACGCACCTGCCCGGCTTCCAGGTCCTGCCGATCTACGGCGGGCAAAGCTACGGCCCGCAGCTGCACGCGCTCAAGCGCGGCGTGCACGTCGTGGTCGGCACGCCCGGGCGAGTCATCGACCACCTGGACAAGGGCACGCTCGACCTCTCGGCGCTGCGGTTCGTAGTGTTGGACGAGGCCGACGAGATGCTGCGCATGGGCTTCATCGACGACGTCGAGCGGGTGCTGCAGGCAACGCCACCGGAGCGCCAGGTGGCGCTGTTTTCCGCGACCATGCCCAGCCAGATCCGCAAGATCGCGCAAAAGCACCTGCGCGACCCGGTGGAGGTGGTGATCAGGAACTCGGTCAGCACCACCCCGCACATCCACCAGCGCTACTGGTTCGTCAGCGGCATGCACAAGCTGGATGCCTTGACGCGCATCCTGGAGGCCGAGCCGTTCGACGCCATGATCATCTTCGCGCGGACCAAGCTCGCCACCGACGAACTGGCCGGCAAGCTGCAGGCACGCGGCCTGGCTGCGGCCGCAATCAACGGCGACATCGCACAGGCGCAACGCGAGCGCGTGATCCAGCAGCTACGCGACGGCAAGCTCGACATCCTGGTGGCGACCGACGTCGCCGCACGCGGGCTGGACGTGGAGCGCATCAGCCACGTGCTGAACTACGACATTCCCTACGACACCGAAAGCTACATCCATCGCATCGGCCGTACCGGCCGCGCCGGACGCAGCGGCGAGGCGATCCTGTTCGTCACGCCGCGCGAGCGGGGCATGCTGCGCGCCATCGAGCGCGCGACCAGGCAGCCGATCGAGCAGATGCAGCTGCCGACGGTGGAAGCAGTCAACGACCTGCGCATCAACAAGTTCAAGCAGCGCATCAGCGATACGCTGGCAGTGGGGAGCCTGGAACTGTTCCAGAAGCTGGTCGAGCAATACGAAAGCGAACACGACGTGCCGGCGCTGGAAATCGCCGCCGCGCTCGCGCGCATCGCGCAAGGCGACCGCCCCCTGCTGCTGCCGCCATCGGCAAAGCACGAAACGCCACCGCGGCTACCTGCGGCCGGCGGCGCGCGCGAACGGCCAGCGCGCGCGCGACCGGACAAGCCGCGGGAGGCGCCGGCGAGCCACGCGGCCGGCGACTCCTTCCAGCCACACACCGAGGCCGGAGTGCGCGAGTCCCGCCAGCGCCCGCTGCGCGCGCATGCCACCGAAGCCGGCAAGCGTACCTATCGCATCGAAGTCGGCCACGAGCACGGCGTGAAGCCGGGCAACATCGTCGGCGCCATCGCCAACGAATCCGGCCTGGACAGCCGCTACATCGGCCGTCTCAGCATCCGTGGGCAGTACAGCCTGATCGACCTGCCCGAGGGCATGCCCGGCGAGATTTTCGAGCACCTGAAAAAAGTCTGGGTGATGCAGCAGCAACTGCGCATCCGCGAATGGGACGGTCAGGAAGGATTCGATGACGCGGACACGCCACCACCCACACGCAAGCCGACCATTCCGCGCGCTGGCAAGCACCCGCCACCCGCACGCAAACCGCGCGCCAGCGGCTTCAAACCGCCCCGCCGCAAATAG
PROTEIN sequence
Length: 639
MSAPAPDDAPAQAVIGVPAPAGFTTFGLHPDVLAVLAEVGYESPSPIQAATIPPLLAGRDVLGTAQTGTGKTAAFALPILSLLDRRPGKPQALVLAPTRELAIQVAEAFQRYATHLPGFQVLPIYGGQSYGPQLHALKRGVHVVVGTPGRVIDHLDKGTLDLSALRFVVLDEADEMLRMGFIDDVERVLQATPPERQVALFSATMPSQIRKIAQKHLRDPVEVVIRNSVSTTPHIHQRYWFVSGMHKLDALTRILEAEPFDAMIIFARTKLATDELAGKLQARGLAAAAINGDIAQAQRERVIQQLRDGKLDILVATDVAARGLDVERISHVLNYDIPYDTESYIHRIGRTGRAGRSGEAILFVTPRERGMLRAIERATRQPIEQMQLPTVEAVNDLRINKFKQRISDTLAVGSLELFQKLVEQYESEHDVPALEIAAALARIAQGDRPLLLPPSAKHETPPRLPAAGGARERPARARPDKPREAPASHAAGDSFQPHTEAGVRESRQRPLRAHATEAGKRTYRIEVGHEHGVKPGNIVGAIANESGLDSRYIGRLSIRGQYSLIDLPEGMPGEIFEHLKKVWVMQQQLRIREWDGQEGFDDADTPPPTRKPTIPRAGKHPPPARKPRASGFKPPRRK*