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scnpilot_solids1_trim150_scaffold_362_curated_21

Organism: solids_Rhodanobacter_4

partial RP 24 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 9 / 38
Location: comp(18322..18777)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039794}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039776};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomon similarity UNIPROT
DB: UniProtKB
  • Identity: 72.2
  • Coverage: 151.0
  • Bit_score: 228
  • Evalue 8.00e-57
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Rhodanobacter denitrificans RepID=M4NED8_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 72.2
  • Coverage: 151.0
  • Bit_score: 228
  • Evalue 5.70e-57
rRNA large subunit m3Psi methyltransferase RlmH similarity KEGG
DB: KEGG
  • Identity: 72.2
  • Coverage: 151.0
  • Bit_score: 228
  • Evalue 1.80e-57

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 456
ATGGCCGTCGGCGAGCACATGCCGGGCTGGGTGGGCGACGGCGTGGCCGAGTATCGCAAGCGCCTGTCCCAGGCCATGCCGATCGAGCTGGTGGAAATCCGCCCCGGACGCCGCGCCAGGCACGGCGATGCAGGCCCCGCCACGCACGAGGAAGGCGTCGCCTTGCTGGCTCAGCTCACGCGGGATACCCAGGTCGTGGCCCTCGACGGCCGCGGCAAGGCCTGGTCCAGCGAGGACCTGGCGGCGCACCTGGGCGCATGGCGCATGGCCGGGCGCGATCTGGCGCTGCTGATTGGCGGCGCCGACGGCCATGCGCCCGAAGTCTTGGCGCGCGCGGACCAGGCCTGGTCGCTCGGTCCGTTGACCTTGCCGCACATGCTGGTGCGCCTGCTGGTGGTGGAGCAGTTGTACCGCGCGCATACCATTCTGGCCGGTCACCCTTATCATCGCGGCTGA
PROTEIN sequence
Length: 152
MAVGEHMPGWVGDGVAEYRKRLSQAMPIELVEIRPGRRARHGDAGPATHEEGVALLAQLTRDTQVVALDGRGKAWSSEDLAAHLGAWRMAGRDLALLIGGADGHAPEVLARADQAWSLGPLTLPHMLVRLLVVEQLYRAHTILAGHPYHRG*