ggKbase home page

scnpilot_solids1_trim150_scaffold_1122_curated

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1122_curated_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..589
DNA (588bp) protein (196aa)
Chaperone protein DnaK n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6U9_9GAMM
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
chaperone protein DnaK
scnpilot_solids1_trim150_scaffold_1122_curated_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

701..1828
DNA (1128bp) protein (376aa)
Chaperone protein DnaJ n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6V0_9GAMM
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
chaperone protein DnaJ
scnpilot_solids1_trim150_scaffold_1122_curated_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1884..2684
DNA (801bp) protein (267aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
dihydrodipicolinate reductase (EC:1.3.1.26)
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6V1_9GAMM
scnpilot_solids1_trim150_scaffold_1122_curated_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2718..3071)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6V2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95193.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids1_trim150_scaffold_1122_curated_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3064..4503)
DNA (1440bp) protein (480aa)
Radical SAM protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6V3_9GAMM
Radical SAM protein {ECO:0000313|EMBL:EIL95194.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
radical SAM protein; K06937
scnpilot_solids1_trim150_scaffold_1122_curated_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4488..5282)
DNA (795bp) protein (265aa)
Prolipoprotein diacylglyceryl transferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6V4_9GAMM
Prolipoprotein diacylglyceryl transferase {ECO:0000313|EMBL:EIL95195.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
prolipoprotein diacylglyceryl transferase
scnpilot_solids1_trim150_scaffold_1122_curated_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5254..5949)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6V5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95196.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1122_curated_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6164..7300
DNA (1137bp) protein (379aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Carbamoyl-phosphate synthase small chain n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6V6_9GAMM
carbamoyl-phosphate synthase small subunit
scnpilot_solids1_trim150_scaffold_1122_curated_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7293..10520
DNA (3228bp) protein (1076aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Carbamoyl-phosphate synthase large chain n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6V7_9GAMM
carbamoyl-phosphate synthase, large subunit
scnpilot_solids1_trim150_scaffold_1122_curated_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10517..10993
DNA (477bp) protein (159aa)
Transcription elongation factor GreA n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6V8_9GAMM
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
transcription elongation factor GreA
scnpilot_solids1_trim150_scaffold_1122_curated_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11288..12199)
DNA (912bp) protein (304aa)
LysR family transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6W0_9GAMM
LysR family transcriptional regulator {ECO:0000313|EMBL:EIL95201.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
transcriptional regulator
scnpilot_solids1_trim150_scaffold_1122_curated_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12572..14590)
DNA (2019bp) protein (673aa)
NADH:flavin oxidoreductase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6W1_9GAMM
NADH:flavin oxidoreductase {ECO:0000313|EMBL:EIL95202.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
NADH:flavin oxidoreductase
scnpilot_solids1_trim150_scaffold_1122_curated_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14679..14936)
DNA (258bp) protein (86aa)
Acyl-CoA-binding protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6W2_9GAMM
Acyl-CoA-binding protein {ECO:0000313|EMBL:EIL95203.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
acyl-CoA-binding protein
scnpilot_solids1_trim150_scaffold_1122_curated_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15048..15725
DNA (678bp) protein (226aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Cytidylate kinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6W3_9GAMM
cytidylate kinase
scnpilot_solids1_trim150_scaffold_1122_curated_15
unknown

Not on your lists

15900..15965
DNA (66bp) protein (22aa)

This feature has no annotations

Displaying 15 items

View Taxonomy