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scnpilot_solids1_trim150_scaffold_910_curated

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_910_curated_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..447)
DNA (447bp) protein (149aa)
Class III aminotransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5H5_9GAMM
Class III aminotransferase {ECO:0000313|EMBL:EIL94716.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
4-aminobutyrate aminotransferase family protein
scnpilot_solids1_trim150_scaffold_910_curated_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(462..1163)
DNA (702bp) protein (234aa)
2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphatephosphatase related protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5H4_9GAMM
2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphatephosphatase related protein {ECO:0000313|EMBL:EIL94715.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
haloacid dehalogenase superfamily protein, phosphoserine phosphatase/2,3-diketo-5-methylthio-1-phosphopentane phosphatase
scnpilot_solids1_trim150_scaffold_910_curated_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1330..1953
DNA (624bp) protein (208aa)
Phosphoesterase PA-phosphatase-like protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5H3_9GAMM
Phosphoesterase PA-phosphatase-like protein {ECO:0000313|EMBL:EIL94714.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
PAP2 superfamily protein
scnpilot_solids1_trim150_scaffold_910_curated_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1953..3389
DNA (1437bp) protein (479aa)
Outer membrane efflux protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5H2_9GAMM
Outer membrane efflux protein {ECO:0000313|EMBL:EIL94713.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
outer membrane protein
scnpilot_solids1_trim150_scaffold_910_curated_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3386..4453
DNA (1068bp) protein (356aa)
RND family efflux transporter MFP subunit n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5H1_9GAMM
RND family efflux transporter MFP subunit {ECO:0000313|EMBL:EIL94712.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
RND family efflux transporter, MFP subunit
scnpilot_solids1_trim150_scaffold_910_curated_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4450..7527
DNA (3078bp) protein (1026aa)
Acriflavin resistance protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5H0_9GAMM
Acriflavin resistance protein {ECO:0000313|EMBL:EIL94711.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
cation/multidrug efflux pump
scnpilot_solids1_trim150_scaffold_910_curated_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7556..8587
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5G9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94710.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_910_curated_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8613..9779)
DNA (1167bp) protein (389aa)
Glycosyl transferase family protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5G8_9GAMM
Glycosyl transferase family protein {ECO:0000313|EMBL:EIL94709.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ADP-heptose:LPS heptosyltransferase
scnpilot_solids1_trim150_scaffold_910_curated_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10079..11473)
DNA (1395bp) protein (465aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Signal transduction histidine kinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5G7_9GAMM
signal transduction histidine kinase
scnpilot_solids1_trim150_scaffold_910_curated_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11470..12150)
DNA (681bp) protein (227aa)
Two component transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5G6_9GAMM
Two component transcriptional regulator {ECO:0000313|EMBL:EIL94707.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
scnpilot_solids1_trim150_scaffold_910_curated_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12320..12634)
DNA (315bp) protein (105aa)
Ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5G5_9GAMM
Ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase {ECO:0000313|EMBL:EIL94706.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase
scnpilot_solids1_trim150_scaffold_910_curated_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12631..13179)
DNA (549bp) protein (183aa)
GCN5-like N-acetyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5G4_9GAMM
GCN5-like N-acetyltransferase {ECO:0000313|EMBL:EIL94705.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative acyltransferase
scnpilot_solids1_trim150_scaffold_910_curated_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13237..14172)
DNA (936bp) protein (312aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ketopantoate reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5G3_9GAMM
scnpilot_solids1_trim150_scaffold_910_curated_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14174..15088)
DNA (915bp) protein (305aa)
Putative acyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5G2_9GAMM
Putative acyltransferase {ECO:0000313|EMBL:EIL94703.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
1-acyl-sn-glycerol-3-phosphate acyltransferase
scnpilot_solids1_trim150_scaffold_910_curated_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15176..16420)
DNA (1245bp) protein (415aa)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
cysteine desulfurase-like protein, SufS subfamily (EC:2.8.1.7)
Cysteine desulfurase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5G1_9GAMM
scnpilot_solids1_trim150_scaffold_910_curated_16
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16543..17862)
DNA (1320bp) protein (440aa)
FeS assembly protein SufD n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5G0_9GAMM
FeS assembly protein SufD {ECO:0000313|EMBL:EIL94701.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Iron-regulated ABC transporter permease protein SufD
scnpilot_solids1_trim150_scaffold_910_curated_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17859..18611)
DNA (753bp) protein (251aa)
FeS assembly ATPase SufC n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5F9_9GAMM
FeS assembly ATPase SufC {ECO:0000313|EMBL:EIL94700.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
FeS assembly ATPase SufC
scnpilot_solids1_trim150_scaffold_910_curated_18
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18721..19764)
DNA (1044bp) protein (348aa)
Cysteine desulfurase activator complex subunit SufB n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5F8_9GAMM
Cysteine desulfurase activator complex subunit SufB {ECO:0000313|EMBL:EIL94699.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Iron-regulated ABC transporter membrane component SufB
Displaying 18 items

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