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scnpilot_solids1_trim150_scaffold_569_curated

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_569_curated_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..1301
DNA (1299bp) protein (433aa)
Peptide chain release factor 3 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1K6_9GAMM
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
bacterial peptide chain release factor 3 (bRF-3)
scnpilot_solids1_trim150_scaffold_569_curated_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1386..2282
DNA (897bp) protein (299aa)
Abortive infection protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1K5_9GAMM
Abortive infection protein {ECO:0000313|EMBL:EIL93346.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative metal-dependent membrane protease
scnpilot_solids1_trim150_scaffold_569_curated_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2420..6082
DNA (3663bp) protein (1221aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Signal transduction histidine kinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1K4_9GAMM
signal transduction histidine kinase
scnpilot_solids1_trim150_scaffold_569_curated_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6210..7220
DNA (1011bp) protein (337aa)
Diguanylate cyclase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1K3_9GAMM
Diguanylate cyclase {ECO:0000313|EMBL:EIL93344.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
diguanylate cyclase (GGDEF) domain-containing protein
scnpilot_solids1_trim150_scaffold_569_curated_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7282..9741)
DNA (2460bp) protein (820aa)
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EIL93343.1}; EC=1.3.8.- {ECO:0000313|EMBL:EIL93343.1};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Acyl-CoA dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1K2_9GAMM
acyl-CoA dehydrogenase
scnpilot_solids1_trim150_scaffold_569_curated_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9751..10503)
DNA (753bp) protein (251aa)
Hydrolase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1K1_9GAMM
Hydrolase {ECO:0000313|EMBL:EIL93342.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative hydrolase or acyltransferase of alpha/beta superfamily
scnpilot_solids1_trim150_scaffold_569_curated_7
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10522..11361
DNA (840bp) protein (280aa)
Transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1K0_9GAMM
transcriptional regulator
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_569_curated_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11491..13275
DNA (1785bp) protein (595aa)
Phosphoenolpyruvate carboxykinase [GTP] {ECO:0000256|HAMAP-Rule:MF_00452, ECO:0000256|SAAS:SAAS00222031}; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00452};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00452};; EC=4.1.1.32 {ECO:0000256|HAMAP-Rule:MF_00452};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Phosphoenolpyruvate carboxykinase [GTP] n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1J9_9GAMM
phosphoenolpyruvate carboxykinase (GTP)
scnpilot_solids1_trim150_scaffold_569_curated_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13392..13937
DNA (546bp) protein (182aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1J8_9GAMM
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:EIL93339.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
RNA polymerase sigma factor, sigma-70 family
scnpilot_solids1_trim150_scaffold_569_curated_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13934..14377
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1J7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93338.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_569_curated_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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14395..15300
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1J6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93337.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_569_curated_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15407..16318)
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1J5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93336.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_569_curated_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16560..19460
DNA (2901bp) protein (967aa)
Diguanylate cyclase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1J4_9GAMM
Diguanylate cyclase {ECO:0000313|EMBL:EIL93335.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
diguanylate cyclase (GGDEF) domain-containing protein
scnpilot_solids1_trim150_scaffold_569_curated_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19467..20387)
DNA (921bp) protein (307aa)
Disulfide bond chaperone n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1J3_9GAMM
33 kDa chaperonin {ECO:0000256|SAAS:SAAS00038673}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
disulfide bond chaperone
scnpilot_solids1_trim150_scaffold_569_curated_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20468..21217
DNA (750bp) protein (250aa)
Monofunctional biosynthetic peptidoglycan transglycosylase {ECO:0000256|HAMAP-Rule:MF_00766, ECO:0000256|SAAS:SAAS00055690}; Short=Monofunctional TGase {ECO:0000256|HAMAP-Rule:MF_00766};; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00766, ECO:0000256|SAAS:SAAS00055699};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Monofunctional biosynthetic peptidoglycan transglycosylase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1J2_9GAMM
monofunctional biosynthetic peptidoglycan transglycosylase
scnpilot_solids1_trim150_scaffold_569_curated_16
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21342..21770
DNA (429bp) protein (143aa)
Putative signal transduction protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1J1_9GAMM
Putative signal transduction protein {ECO:0000313|EMBL:EIL93332.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative signal-transduction protein containing cAMP-binding and CBS domains
scnpilot_solids1_trim150_scaffold_569_curated_17
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21781..23124)
DNA (1344bp) protein (448aa)
ATP/ADP translocase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WNF5_9GAMM
ATP/ADP translocase {ECO:0000313|EMBL:EIM00997.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
ATP/ADP translocase
scnpilot_solids1_trim150_scaffold_569_curated_18
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23187..24794
DNA (1608bp) protein (536aa)
Glucose-methanol-choline oxidoreductase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1I9_9GAMM
Glucose-methanol-choline oxidoreductase {ECO:0000313|EMBL:EIL93330.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
choline dehydrogenase-like flavoprotein
scnpilot_solids1_trim150_scaffold_569_curated_19
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24779..26722)
DNA (1944bp) protein (648aa)
Peptidase M48 Ste24p n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1I8_9GAMM
Peptidase M48 Ste24p {ECO:0000313|EMBL:EIL93329.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Zn-dependent protease with chaperone function
scnpilot_solids1_trim150_scaffold_569_curated_20
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26771..27358)
DNA (588bp) protein (196aa)
LemA family protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1I7_9GAMM
LemA family protein {ECO:0000313|EMBL:EIL93328.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_569_curated_21
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27414..28109
DNA (696bp) protein (232aa)
Beta-lactamase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1I6_9GAMM
Beta-lactamase {ECO:0000313|EMBL:EIL93327.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
penicillin-binding protein, beta-lactamase class C
Displaying 21 items

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