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scnpilot_solids1_trim150_scaffold_160_curated

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_160_curated_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..666)
DNA (666bp) protein (222aa)
Cytochrome c oxidase subunit 2; EC=1.9.3.1;; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Cytochrome c oxidase subunit 2 n=1 Tax=Rhodanobacter denitrificans RepID=M4NI07_9GAMM
cytochrome c oxidase, subunit II
scnpilot_solids1_trim150_scaffold_160_curated_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(663..1127)
DNA (465bp) protein (155aa)
Integral membrane protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W315_9GAMM
Integral membrane protein {ECO:0000313|EMBL:EIL93856.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
integral membrane protein
scnpilot_solids1_trim150_scaffold_160_curated_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1388..4576
DNA (3189bp) protein (1063aa)
Bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:EIL93857.1}; EC=1.5.99.8 {ECO:0000313|EMBL:EIL93857.1};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
delta-1-pyrroline-5-carboxylate dehydrogenase (EC:1.5.1.12 1.5.99.8)
Bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W316_9GAMM
scnpilot_solids1_trim150_scaffold_160_curated_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4748..4939
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W317_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93858.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids1_trim150_scaffold_160_curated_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5140..6225
DNA (1086bp) protein (362aa)
AraC family transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W318_9GAMM
AraC family transcriptional regulator {ECO:0000313|EMBL:EIL93859.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
AraC family transcriptional regulator
scnpilot_solids1_trim150_scaffold_160_curated_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6439..7674
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W319_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93860.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_160_curated_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7671..8837
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W320_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93861.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_160_curated_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8903..11395
DNA (2493bp) protein (831aa)
TonB dependent receptor n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W321_9GAMM
TonB dependent receptor {ECO:0000313|EMBL:EIL93862.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
TonB dependent receptor
scnpilot_solids1_trim150_scaffold_160_curated_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11554..12963
DNA (1410bp) protein (470aa)
Aldehyde dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W322_9GAMM
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
NAD-dependent aldehyde dehydrogenase
scnpilot_solids1_trim150_scaffold_160_curated_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13057..13350
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W323_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93864.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_160_curated_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13485..16919
DNA (3435bp) protein (1145aa)
Ankyrin repeat-containing protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W324_9GAMM
Ankyrin repeat-containing protein {ECO:0000313|EMBL:EIL93865.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ankyrin repeat-containing protein
scnpilot_solids1_trim150_scaffold_160_curated_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16964..18799)
DNA (1836bp) protein (612aa)
Transporter, monovalent cation:proton antiporter-2 (CPA2) family protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W325_9GAMM
Transporter, monovalent cation:proton antiporter-2 (CPA2) family protein {ECO:0000313|EMBL:EIL93866.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Kef-type potassium/proton antiporter, CPA2 family
scnpilot_solids1_trim150_scaffold_160_curated_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18949..21144)
DNA (2196bp) protein (732aa)
Peptidyl-dipeptidase Dcp n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W326_9GAMM
Peptidyl-dipeptidase Dcp {ECO:0000313|EMBL:EIL93867.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Zn-dependent oligopeptidase
scnpilot_solids1_trim150_scaffold_160_curated_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21427..21774)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W327_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93868.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_160_curated_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21827..22507)
DNA (681bp) protein (227aa)
ATP-dependent dethiobiotin synthetase BioD {ECO:0000256|HAMAP-Rule:MF_00336}; EC=6.3.3.3 {ECO:0000256|HAMAP-Rule:MF_00336};; DTB synthetase {ECO:0000256|HAMAP-Rule:MF_00336}; Dethiobiotin synthase {ECO:0000256|HAMAP-Rule:MF_00336}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ATP-dependent dethiobiotin synthetase BioD n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W328_9GAMM
dethiobiotin synthase
scnpilot_solids1_trim150_scaffold_160_curated_16
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22504..23187)
DNA (684bp) protein (228aa)
Transglutaminase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W329_9GAMM
Transglutaminase {ECO:0000313|EMBL:EIL93870.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
transglutaminase-like protein
scnpilot_solids1_trim150_scaffold_160_curated_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23249..23740
DNA (492bp) protein (164aa)
GAF sensor protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W330_9GAMM
GAF sensor protein {ECO:0000313|EMBL:EIL93871.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
GAF domain-containing protein
scnpilot_solids1_trim150_scaffold_160_curated_18
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23765..24424)
DNA (660bp) protein (220aa)
Probable GTP-binding protein EngB n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W331_9GAMM
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
cell division checkpoint GTPase YihA
scnpilot_solids1_trim150_scaffold_160_curated_19
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24541..25308
DNA (768bp) protein (256aa)
Cytochrome c4 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W332_9GAMM
Cytochrome c4 {ECO:0000313|EMBL:EIL93873.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
cytochrome c553
scnpilot_solids1_trim150_scaffold_160_curated_20
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25375..26268
DNA (894bp) protein (298aa)
Thiol:disulfide interchange protein DsbA n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W333_9GAMM
Thiol:disulfide interchange protein DsbA {ECO:0000313|EMBL:EIL93874.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
protein-disulfide isomerase
scnpilot_solids1_trim150_scaffold_160_curated_21
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26325..26975
DNA (651bp) protein (217aa)
Thiol:disulfide interchange protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W334_9GAMM
Thiol:disulfide interchange protein {ECO:0000256|PIRNR:PIRNR001488}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
protein-disulfide isomerase
scnpilot_solids1_trim150_scaffold_160_curated_22
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27088..27897
DNA (810bp) protein (270aa)
Metal-dependent hydrolase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W335_9GAMM
Metal-dependent hydrolase {ECO:0000313|EMBL:EIL93876.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
metal-dependent hydrolase
scnpilot_solids1_trim150_scaffold_160_curated_23
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27894..28310
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NAE5_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_160_curated_24
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28224..29870)
DNA (1647bp) protein (549aa)
Beta (1-6) glucan synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W337_9GAMM
Beta (1-6) glucan synthase {ECO:0000313|EMBL:EIL93878.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
exo-beta-1,3-glucanase
scnpilot_solids1_trim150_scaffold_160_curated_25
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29947..31992
DNA (2046bp) protein (682aa)
Soluble lytic murein transglycosylase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W338_9GAMM
Soluble lytic murein transglycosylase {ECO:0000313|EMBL:EIL93879.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
soluble lytic murein transglycosylase-like protein
scnpilot_solids1_trim150_scaffold_160_curated_26
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32030..32968
DNA (939bp) protein (313aa)
Putative nucleoside-diphosphate sugar epimerase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W339_9GAMM
Putative nucleoside-diphosphate sugar epimerase {ECO:0000313|EMBL:EIL93880.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative nucleoside-diphosphate sugar epimerase
scnpilot_solids1_trim150_scaffold_160_curated_27
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33128..34723)
DNA (1596bp) protein (532aa)
Sulfotransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W340_9GAMM
Sulfotransferase {ECO:0000313|EMBL:EIL93881.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
tetratricopeptide repeat protein,sulfotransferase family protein
scnpilot_solids1_trim150_scaffold_160_curated_28
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34895..36142
DNA (1248bp) protein (416aa)
Multifunctional CCA protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W341_9GAMM
Multifunctional CCA protein {ECO:0000256|HAMAP-Rule:MF_01261, ECO:0000256|SAAS:SAAS00054545}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
tRNA nucleotidyltransferase/poly(A) polymerase
scnpilot_solids1_trim150_scaffold_160_curated_29
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36150..38420
DNA (2271bp) protein (757aa)
Phosphoglycerol transferase family protein, alkaline phosphatase superfamily n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W342_9GAMM
Phosphoglycerol transferase family protein, alkaline phosphatase superfamily {ECO:0000313|EMBL:EIL93883.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
phosphoglycerol transferase family protein, alkaline phosphatase superfamily
scnpilot_solids1_trim150_scaffold_160_curated_30
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38397..38819)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W343_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93884.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
VanZ like family protein
Displaying items 1-30 of 55 in total

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