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scnpilot_solids1_trim150_scaffold_673_curated

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_673_curated_1
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..1150)
DNA (1149bp) protein (383aa)
Nuclease-like protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5M9_9GAMM
nuclease-like protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_673_curated_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1568..4000)
DNA (2433bp) protein (811aa)
UPF0753 protein UU7_01382 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5N0_9GAMM
UPF0753 protein UU7_01382 {ECO:0000256|HAMAP-Rule:MF_01871}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein; K09822 hypothetical protein
scnpilot_solids1_trim150_scaffold_673_curated_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4024..5595)
DNA (1572bp) protein (524aa)
NADH dehydrogenase; K05577 NAD(P)H-quinone oxidoreductase subunit 5 [EC:1.6.5.3]
NADH dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5N1_9GAMM
NADH dehydrogenase {ECO:0000313|EMBL:EIL94772.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids1_trim150_scaffold_673_curated_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5775..6782)
DNA (1008bp) protein (336aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synthase {ECO:0000256|PIRNR:PIRNR004930}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5N2_9GAMM
Sua5/YciO/YrdC/YwlC family protein
scnpilot_solids1_trim150_scaffold_673_curated_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6990..7922
DNA (933bp) protein (311aa)
Transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5N3_9GAMM
Transcriptional regulator {ECO:0000313|EMBL:EIL94774.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
lysR; transcriptional regulator; K03717 LysR family transcriptional regulator, transcriptional activator of nhaA
scnpilot_solids1_trim150_scaffold_673_curated_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7971..8897)
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5N4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94775.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_673_curated_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9138..10229
DNA (1092bp) protein (364aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5N5_9GAMM
scnpilot_solids1_trim150_scaffold_673_curated_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10238..10660)
DNA (423bp) protein (141aa)
Osmotically inducible protein OsmC n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5N6_9GAMM
Osmotically inducible protein OsmC {ECO:0000313|EMBL:EIL94777.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
peroxiredoxin, OsmC subfamily
scnpilot_solids1_trim150_scaffold_673_curated_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10805..11080
DNA (276bp) protein (92aa)
Acetyltransferase-like protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5N7_9GAMM
Acetyltransferase-like protein {ECO:0000313|EMBL:EIL94778.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative acetyltransferase
scnpilot_solids1_trim150_scaffold_673_curated_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11211..11804
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5N8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94779.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_673_curated_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11890..12177
DNA (288bp) protein (96aa)
Pentapeptide MXKDX repeat-containing protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5N9_9GAMM
Pentapeptide MXKDX repeat-containing protein {ECO:0000313|EMBL:EIL94780.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
pentapeptide MXKDX repeat protein
scnpilot_solids1_trim150_scaffold_673_curated_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12280..13362
DNA (1083bp) protein (361aa)
Putative oxidoreductase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5P0_9GAMM
Putative oxidoreductase {ECO:0000313|EMBL:EIL94781.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
2-nitropropane dioxygenase-like enzyme
scnpilot_solids1_trim150_scaffold_673_curated_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13404..13868
DNA (465bp) protein (155aa)
Ribosomal silencing factor RsfS n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5P2_9GAMM
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
iojap-like ribosome-associated protein
scnpilot_solids1_trim150_scaffold_673_curated_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13881..14351
DNA (471bp) protein (157aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039794}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039776};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomo
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5P3_9GAMM
rRNA large subunit m3Psi methyltransferase RlmH
scnpilot_solids1_trim150_scaffold_673_curated_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14374..14823
DNA (450bp) protein (150aa)
Acetyltransferase, GNaT family protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5P4_9GAMM
Acetyltransferase, GNaT family protein {ECO:0000313|EMBL:EIL94785.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
acetyltransferase
scnpilot_solids1_trim150_scaffold_673_curated_16
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14850..15425
DNA (576bp) protein (192aa)
Maf-like protein UU7_01457 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5P5_9GAMM
Maf-like protein UU7_01457 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
MAF protein
scnpilot_solids1_trim150_scaffold_673_curated_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15409..16227)
DNA (819bp) protein (273aa)
Putative metal-dependent membrane protease n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5P6_9GAMM
Putative metal-dependent membrane protease {ECO:0000313|EMBL:EIL94787.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative metal-dependent membrane protease
scnpilot_solids1_trim150_scaffold_673_curated_18
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16407..16925
DNA (519bp) protein (173aa)
Putative methyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5P7_9GAMM
Putative methyltransferase {ECO:0000313|EMBL:EIL94788.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative methyltransferase
scnpilot_solids1_trim150_scaffold_673_curated_19
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17186..17578)
DNA (393bp) protein (131aa)
Membrane-associated protein in eicosanoid and glutathione metabolism (MAPEG) n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5P8_9GAMM
Membrane-associated protein in eicosanoid and glutathione metabolism (MAPEG) {ECO:0000313|EMBL:EIL94789.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
MAPEG family
scnpilot_solids1_trim150_scaffold_673_curated_20
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17701..18564
DNA (864bp) protein (288aa)
Putative metallopeptidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5P9_9GAMM
Putative metallopeptidase {ECO:0000313|EMBL:EIL94790.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative metalloprotease
scnpilot_solids1_trim150_scaffold_673_curated_21
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18769..19155
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5Q0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94791.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative Fe-S oxidoreductase
scnpilot_solids1_trim150_scaffold_673_curated_22
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19267..20064)
DNA (798bp) protein (266aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002FFDCC7
Uncharacterized protein {ECO:0000313|EMBL:AIF47437.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
putative transmembrane anti-sigma factor
scnpilot_solids1_trim150_scaffold_673_curated_23
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20051..20623)
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI000319D040
RNA polymerase sigma factor {ECO:0000313|EMBL:AHX12428.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
RNA polymerase sigma factor
scnpilot_solids1_trim150_scaffold_673_curated_24
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20747..21694
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00031CD346
Metallophosphoesterase {ECO:0000313|EMBL:AHX12429.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
metallophosphoesterase
scnpilot_solids1_trim150_scaffold_673_curated_25
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21691..22029
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002D2F3D7
Uncharacterized protein {ECO:0000313|EMBL:AHX12430.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
blue (type 1) copper domain-containing protein
scnpilot_solids1_trim150_scaffold_673_curated_26
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22076..23689)
DNA (1614bp) protein (538aa)
Sulfotransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5Q1_9GAMM
Sulfotransferase {ECO:0000313|EMBL:EIL94792.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
sulfotransferase family protein
scnpilot_solids1_trim150_scaffold_673_curated_27
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23770..24615)
DNA (846bp) protein (282aa)
ATP-dependent RNA helicase DeaD {ECO:0000256|HAMAP-Rule:MF_00964}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00964};; Cold-shock DEAD box protein A {ECO:0000256|HAMAP-Rule:MF_00964}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
DNA/RNA helicase, superfamily II (EC:5.99.1.-)
ATP-dependent RNA helicase DeaD n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5Q2_9GAMM
Displaying 27 items

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