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scnpilot_solids1_trim150_scaffold_664_curated

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Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_664_curated_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..325)
DNA (324bp) protein (108aa)
Glutaryl-CoA dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W610_9GAMM
Glutaryl-CoA dehydrogenase {ECO:0000313|EMBL:EIL94901.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
acyl-CoA dehydrogenase
scnpilot_solids1_trim150_scaffold_664_curated_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

447..1322
DNA (876bp) protein (292aa)
Drug-metabolite transporter superfamily protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W609_9GAMM
Drug-metabolite transporter superfamily protein {ECO:0000313|EMBL:EIL94900.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
EamA-like transporter family
scnpilot_solids1_trim150_scaffold_664_curated_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1336..2307)
DNA (972bp) protein (324aa)
Putative transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W608_9GAMM
Putative transcriptional regulator {ECO:0000313|EMBL:EIL94899.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative transcriptional regulator
scnpilot_solids1_trim150_scaffold_664_curated_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2392..3246
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W607_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94898.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_664_curated_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3243..3884
DNA (642bp) protein (214aa)
Lysine exporter protein LysE/YggA n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W606_9GAMM
Lysine exporter protein LysE/YggA {ECO:0000313|EMBL:EIL94897.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
homoserine/threonine efflux protein
scnpilot_solids1_trim150_scaffold_664_curated_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3893..4822)
DNA (930bp) protein (310aa)
5'-nucleotidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W605_9GAMM
5'-nucleotidase {ECO:0000313|EMBL:EIL94896.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
5'-nucleotidase
scnpilot_solids1_trim150_scaffold_664_curated_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4896..5657)
DNA (762bp) protein (254aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W604_9GAMM
putative sugar kinase
scnpilot_solids1_trim150_scaffold_664_curated_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6049..10974)
DNA (4926bp) protein (1642aa)
NAD-specific glutamate dehydrogenase (EC:1.4.1.2)
NAD-glutamate dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W603_9GAMM
NAD-glutamate dehydrogenase {ECO:0000313|EMBL:EIL94894.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids1_trim150_scaffold_664_curated_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11503..12681
DNA (1179bp) protein (393aa)
Membrane fusion protein of RND family multidrug efflux pump n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W602_9GAMM
Membrane fusion protein of RND family multidrug efflux pump {ECO:0000313|EMBL:EIL94893.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
RND family efflux transporter, MFP subunit
scnpilot_solids1_trim150_scaffold_664_curated_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12694..15870
DNA (3177bp) protein (1059aa)
Hydrophobe/amphiphile efflux-1 (HAE1) family transporter n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W601_9GAMM
Hydrophobe/amphiphile efflux-1 (HAE1) family transporter {ECO:0000313|EMBL:EIL94892.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hydrophobe/amphiphile efflux-1 (HAE1) family transporter
scnpilot_solids1_trim150_scaffold_664_curated_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16034..17194)
DNA (1161bp) protein (387aa)
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W600_9GAMM
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:EIL94891.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
acyl-CoA dehydrogenase
scnpilot_solids1_trim150_scaffold_664_curated_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17349..18278
DNA (930bp) protein (310aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5Z9_9GAMM
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:EIL94890.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
methylase involved in ubiquinone/menaquinone biosynthesis
scnpilot_solids1_trim150_scaffold_664_curated_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18296..19372
DNA (1077bp) protein (359aa)
Cobalamin-dependent methionine synthase I n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5Z8_9GAMM
Cobalamin-dependent methionine synthase I {ECO:0000313|EMBL:EIL94889.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
cobalamin-dependent methionine synthase I
scnpilot_solids1_trim150_scaffold_664_curated_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19518..22226
DNA (2709bp) protein (903aa)
methionine synthase (B12-dependent) (EC:2.1.1.13)
5-methyltetrahydrofolate--homocysteine methyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5Z7_9GAMM
5-methyltetrahydrofolate--homocysteine methyltransferase {ECO:0000313|EMBL:EIL94888.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids1_trim150_scaffold_664_curated_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22228..22569)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5Z6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94887.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_664_curated_16
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23061..23768
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5Z5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94886.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_664_curated_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23779..25866
DNA (2088bp) protein (696aa)
Putative transmembrane protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5Z4_9GAMM
Putative transmembrane protein {ECO:0000313|EMBL:EIL94885.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative transmembrane protein
scnpilot_solids1_trim150_scaffold_664_curated_18
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25863..26501
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5Z3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94884.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_664_curated_19
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26524..27132
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5Z2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94883.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_664_curated_20
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27154..30876)
DNA (3723bp) protein (1241aa)
GAF sensor-containing diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5Z1_9GAMM
GAF sensor-containing diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:EIL94882.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
diguanylate cyclase (GGDEF) domain-containing protein
scnpilot_solids1_trim150_scaffold_664_curated_21
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30998..32272)
DNA (1275bp) protein (425aa)
ECF subfamily RNA polymerase sigma factor n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5Z0_9GAMM
ECF subfamily RNA polymerase sigma factor {ECO:0000313|EMBL:EIL94881.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
RNA polymerase, sigma subunit, ECF family
scnpilot_solids1_trim150_scaffold_664_curated_22
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32559..33071)
DNA (513bp) protein (171aa)
Putative prepilin like protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5Y9_9GAMM
Putative prepilin like protein {ECO:0000313|EMBL:EIL94880.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
prepilin-type N-terminal cleavage/methylation domain-containing protein
scnpilot_solids1_trim150_scaffold_664_curated_23
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33083..36928)
DNA (3846bp) protein (1282aa)
Putative type 4 fimbrial biogenesis protein PilY1 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5Y8_9GAMM
Putative type 4 fimbrial biogenesis protein PilY1 {ECO:0000313|EMBL:EIL94879.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Tfp pilus assembly protein, tip-associated adhesin PilY1
scnpilot_solids1_trim150_scaffold_664_curated_24
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36996..37583)
DNA (588bp) protein (196aa)
Putative Tfp pilus assembly protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5Y7_9GAMM
Putative Tfp pilus assembly protein {ECO:0000313|EMBL:EIL94878.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Tfp pilus assembly protein PilX
scnpilot_solids1_trim150_scaffold_664_curated_25
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37585..38604)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5Y6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94877.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
prepilin-type N-terminal cleavage/methylation domain-containing protein
scnpilot_solids1_trim150_scaffold_664_curated_26
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38601..39122)
DNA (522bp) protein (174aa)
Type IV pilus modification protein PilV n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5Y5_9GAMM
Type IV pilus modification protein PilV {ECO:0000313|EMBL:EIL94876.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
type IV pilus modification protein PilV
scnpilot_solids1_trim150_scaffold_664_curated_27
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39125..39715)
DNA (591bp) protein (197aa)
Tfp pilus assembly protein FimT-like protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5Y4_9GAMM
Tfp pilus assembly protein FimT-like protein {ECO:0000313|EMBL:EIL94875.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
prepilin-type N-terminal cleavage/methylation domain-containing protein
scnpilot_solids1_trim150_scaffold_664_curated_28
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40065..41024)
DNA (960bp) protein (320aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
(E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5Y3_9GAMM
scnpilot_solids1_trim150_scaffold_664_curated_29
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41112..41612)
DNA (501bp) protein (167aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
signal peptidase II (EC:3.4.23.36)
Lipoprotein signal peptidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5Y2_9GAMM
scnpilot_solids1_trim150_scaffold_664_curated_30
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41760..44621)
DNA (2862bp) protein (954aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02002}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5Y1_9GAMM
Displaying items 1-30 of 33 in total

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