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scnpilot_solids1_trim150_scaffold_252_curated

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_252_curated_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..1273
DNA (1272bp) protein (424aa)
Bifunctional malic enzyme oxidoreductase/phosphotransacetylase {ECO:0000313|EMBL:EIL93401.1}; EC=1.1.1.40 {ECO:0000313|EMBL:EIL93401.1};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Bifunctional malic enzyme oxidoreductase/phosphotransacetylase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1R0_9GAMM
malic enzyme
scnpilot_solids1_trim150_scaffold_252_curated_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1430..4129
DNA (2700bp) protein (900aa)
Pyruvate dehydrogenase E1 component {ECO:0000256|PIRNR:PIRNR000156}; EC=1.2.4.1 {ECO:0000256|PIRNR:PIRNR000156};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
pyruvate dehydrogenase E1 component, homodimeric type; K00163 pyruvate dehydrogenase E1 component [EC:1.2.4.1]
Pyruvate dehydrogenase E1 component n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1Q9_9GAMM
scnpilot_solids1_trim150_scaffold_252_curated_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4222..4554)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W245_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93536.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_252_curated_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4642..5310)
DNA (669bp) protein (223aa)
Glutathione S-transferase domain-containing protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W244_9GAMM
Glutathione S-transferase domain-containing protein {ECO:0000313|EMBL:EIL93535.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
glutathione S-transferase
scnpilot_solids1_trim150_scaffold_252_curated_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5380..6300)
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W243_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93534.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_252_curated_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6327..7592)
DNA (1266bp) protein (422aa)
Major facilitator superfamily protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W242_9GAMM
Major facilitator superfamily protein {ECO:0000313|EMBL:EIL93533.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
major facilitator superfamily protein
scnpilot_solids1_trim150_scaffold_252_curated_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7739..8041
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W241_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93532.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Protein of unknown function (DUF3247)
scnpilot_solids1_trim150_scaffold_252_curated_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8045..9244)
DNA (1200bp) protein (400aa)
Inner membrane protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W240_9GAMM
Inner membrane protein {ECO:0000313|EMBL:EIL93531.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
acyltransferase family protein
scnpilot_solids1_trim150_scaffold_252_curated_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9389..10255
DNA (867bp) protein (289aa)
AlgR/AgrA/LytR family regulatory protein RpfD n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W239_9GAMM
AlgR/AgrA/LytR family regulatory protein RpfD {ECO:0000313|EMBL:EIL93530.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
response regulator of the LytR/AlgR family
scnpilot_solids1_trim150_scaffold_252_curated_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10335..11072
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W238_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93529.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_252_curated_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11141..11599
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W237_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93528.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_252_curated_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11622..12038)
DNA (417bp) protein (139aa)
UspA domain-containing protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W236_9GAMM
UspA domain-containing protein {ECO:0000313|EMBL:EIL93527.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
universal stress protein UspA-like protein
scnpilot_solids1_trim150_scaffold_252_curated_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12302..12760
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W235_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93526.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_252_curated_14
unknown

Not on your lists

12874..13035
DNA (162bp) protein (54aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_252_curated_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13035..13508
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W234_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93525.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_252_curated_16
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13562..14416
DNA (855bp) protein (285aa)
TonB family protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W233_9GAMM
TonB family protein {ECO:0000313|EMBL:EIL93524.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
outer membrane transport energization protein TonB
scnpilot_solids1_trim150_scaffold_252_curated_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14535..15287
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W231_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93522.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Protein of unknown function (DUF2884)
scnpilot_solids1_trim150_scaffold_252_curated_18
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15372..15947
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W230_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93521.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_252_curated_19
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16004..16312
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W229_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93520.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Protein of unknown function (DUF2845)
scnpilot_solids1_trim150_scaffold_252_curated_20
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16429..17280
DNA (852bp) protein (284aa)
Small-conductance mechanosensitive channel n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W228_9GAMM
Small-conductance mechanosensitive channel {ECO:0000313|EMBL:EIL93519.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
small-conductance mechanosensitive channel
scnpilot_solids1_trim150_scaffold_252_curated_21
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17310..20897)
DNA (3588bp) protein (1196aa)
Membrane protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W227_9GAMM
Membrane protein {ECO:0000313|EMBL:EIL93518.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
aminopeptidase N
scnpilot_solids1_trim150_scaffold_252_curated_22
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20991..21875)
DNA (885bp) protein (295aa)
ABC transporter ATP-binding protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W226_9GAMM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EIL93517.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ABC-type multidrug transport system, ATPase component
scnpilot_solids1_trim150_scaffold_252_curated_23
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22102..23511
DNA (1410bp) protein (470aa)
Acetyltransferase component of pyruvate dehydrogenase complex {ECO:0000256|RuleBase:RU361137}; EC=2.3.1.12 {ECO:0000256|RuleBase:RU361137};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Dihydrolipoamide acetyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W225_9GAMM
pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form
scnpilot_solids1_trim150_scaffold_252_curated_24
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23526..25337
DNA (1812bp) protein (604aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
dihydrolipoamide dehydrogenase (EC:1.8.1.4)
Dihydrolipoamide dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W224_9GAMM
scnpilot_solids1_trim150_scaffold_252_curated_25
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25505..26008)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W223_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93514.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein; K06006 periplasmic protein CpxP
scnpilot_solids1_trim150_scaffold_252_curated_26
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26142..26843
DNA (702bp) protein (234aa)
AbfR arabinofuranosidase two component system response regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W222_9GAMM
AbfR arabinofuranosidase two component system response regulator {ECO:0000313|EMBL:EIL93513.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
transcriptional regulator; K07662 two-component system, OmpR family, response regulator CpxR
scnpilot_solids1_trim150_scaffold_252_curated_27
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26840..28192
DNA (1353bp) protein (451aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W221_9GAMM
periplasmic sensor signal transduction histidine kinase
scnpilot_solids1_trim150_scaffold_252_curated_28
unknown

Not on your lists

29180..29509
DNA (330bp) protein (110aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_252_curated_29
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29837..31825)
DNA (1989bp) protein (663aa)
Uncharacterized protein {ECO:0000313|EMBL:AKH22379.1}; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
Putative transmembrane signal peptide protein id=4909413 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Desulfomicrobium baculatum genus=Desulfomicrobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
putative transmembrane signal peptide protein
scnpilot_solids1_trim150_scaffold_252_curated_30
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31827..32429)
DNA (603bp) protein (201aa)
LemA family protein n=1 Tax=Thiocapsa marina 5811 RepID=F9U802_9GAMM
LemA family protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
Displaying items 1-30 of 59 in total

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