ggKbase home page

scnpilot_solids1_trim150_scaffold_2792_curated

Search features with annotation key words

Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2792_curated_1
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..210)
DNA (210bp) protein (70aa)
glutaryl-7-ACA acylase n=1 Tax=Sphingomonas melonis RepID=UPI00036A7B48
Sphingomonas taxi strain 30a NODE_34, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26144.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
peptidase, s15 family protein; K06978
scnpilot_solids1_trim150_scaffold_2792_curated_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(248..2005)
DNA (1758bp) protein (586aa)
gamma-glutamyltransferase 1 (EC:2.3.2.2)
Gamma-glutamyltranspeptidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W599_9GAMM
Gamma-glutamyltranspeptidase {ECO:0000313|EMBL:EIL94640.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids1_trim150_scaffold_2792_curated_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2270..4732)
DNA (2463bp) protein (821aa)
Outer membrane receptor for ferrienterochelin and colicins n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5A0_9GAMM
Outer membrane receptor for ferrienterochelin and colicins {ECO:0000313|EMBL:EIL94641.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
outer membrane receptor for ferrienterochelin and colicins; K02014 iron complex outermembrane recepter protein
scnpilot_solids1_trim150_scaffold_2792_curated_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5059..5961)
DNA (903bp) protein (301aa)
LysR family transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5A1_9GAMM
LysR family transcriptional regulator {ECO:0000313|EMBL:EIL94642.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
LysR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_2792_curated_5
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7045..7599
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0GMN5_9SPHN
TonB-dependent receptor-like protein {ECO:0000313|EMBL:EZP67325.1}; Flags: Precursor;; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis (Pseudomonas paucimobilis).;"
TonB-dependent receptor-like protein
Displaying 5 items

View Taxonomy