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scnpilot_solids1_trim150_scaffold_1022_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1022_curated_1
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

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207..2822
DNA (2616bp) protein (872aa)
Orf15 n=3 Tax=Pseudomonas syringae group RepID=Q6VEB1_PSESY
Uncharacterized protein {ECO:0000313|EMBL:KJS08442.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1022_curated_2
Thalassospira profundimaris, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3012..3602
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2L9S5_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKF06951.1}; TaxID=1177928 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira profundimaris WP0211.;"
scnpilot_solids1_trim150_scaffold_1022_curated_3
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3666..4520
DNA (855bp) protein (285aa)
Putative uncharacterized protein n=1 Tax=Xanthomonas axonopodis pv. citrumelo F1 RepID=G2LRD2_9XANT
Uncharacterized protein {ECO:0000313|EMBL:KDE89392.1}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia M30.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1022_curated_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4885..5730)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU28_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90719.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein; K13472 sulfotransferase
scnpilot_solids1_trim150_scaffold_1022_curated_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5813..6820)
DNA (1008bp) protein (336aa)
LacI family transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU29_9GAMM
LacI family transcriptional regulator {ECO:0000313|EMBL:EIL90720.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator
scnpilot_solids1_trim150_scaffold_1022_curated_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6837..9557)
DNA (2721bp) protein (907aa)
beta-mannosidase; K15855 exo-1,4-beta-D-glucosaminidase [EC:3.2.1.165]
Glycoside hydrolase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU30_9GAMM
Glycoside hydrolase {ECO:0000313|EMBL:EIL90721.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids1_trim150_scaffold_1022_curated_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9562..10947)
DNA (1386bp) protein (462aa)
Amino acid permease-associated region n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU31_9GAMM
Amino acid permease-associated region {ECO:0000313|EMBL:EIL90722.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
amino acid permease-associated region
scnpilot_solids1_trim150_scaffold_1022_curated_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11109..14309)
DNA (3201bp) protein (1067aa)
TonB-dependent receptor n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU32_9GAMM
TonB-dependent receptor {ECO:0000313|EMBL:EIL90723.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
TonB-dependent receptor
scnpilot_solids1_trim150_scaffold_1022_curated_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14315..15364)
DNA (1050bp) protein (350aa)
Glucokinase {ECO:0000313|EMBL:EIL90724.1}; EC=2.7.1.2 {ECO:0000313|EMBL:EIL90724.1};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
glucokinase (EC:2.7.1.2)
Glucokinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU33_9GAMM
scnpilot_solids1_trim150_scaffold_1022_curated_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15817..16782
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU34_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90725.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1022_curated_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16893..17381)
DNA (489bp) protein (163aa)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
L-glutamine synthetase (EC:6.3.1.2)
Glutamine synthetase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU35_9GAMM
Displaying 11 items

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