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scnpilot_solids1_trim150_scaffold_631_curated

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_631_curated_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..199)
DNA (198bp) protein (66aa)
Peptide chain release factor 3 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1K6_9GAMM
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
bacterial peptide chain release factor 3 (bRF-3)
scnpilot_solids1_trim150_scaffold_631_curated_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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485..1051
DNA (567bp) protein (189aa)
Putative manganese efflux pump MntP n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1K7_9GAMM
Putative manganese efflux pump MntP {ECO:0000256|HAMAP-Rule:MF_01521}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_631_curated_3
unknown

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1183..1347
DNA (165bp) protein (55aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_631_curated_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1344..5522
DNA (4179bp) protein (1393aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1K8_9GAMM
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:EIL93349.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
multi-sensor hybrid histidine kinase
scnpilot_solids1_trim150_scaffold_631_curated_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5615..6775
DNA (1161bp) protein (387aa)
Response regulator containing a CheY-like receiver domain and an HD-GYP domain n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1K9_9GAMM
Response regulator containing a CheY-like receiver domain and an HD-GYP domain {ECO:0000313|EMBL:EIL93350.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
response regulator containing a CheY-like receiver domain and an HD-GYP domain; K07814 putative two-component system response regulator
scnpilot_solids1_trim150_scaffold_631_curated_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6835..7554)
DNA (720bp) protein (240aa)
Winged helix family two component transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1L0_9GAMM
Winged helix family two component transcriptional regulator {ECO:0000313|EMBL:EIL93351.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
winged helix family two component transcriptional regulator; K07667 two-component system, OmpR family, KDP operon response regulator KdpE
scnpilot_solids1_trim150_scaffold_631_curated_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7551..8996)
DNA (1446bp) protein (482aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
osmosensitive K+ channel signal transduction histidine kinase; K07646 two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
Osmosensitive K+ channel signal transduction histidine kinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1L1_9GAMM
scnpilot_solids1_trim150_scaffold_631_curated_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9039..10916)
DNA (1878bp) protein (626aa)
Probable potassium transport system protein kup n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1L2_9GAMM
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
K+ transporter
scnpilot_solids1_trim150_scaffold_631_curated_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11185..13368)
DNA (2184bp) protein (728aa)
Elongation factor G n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1L6_9GAMM
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
translation elongation factor EF-G
scnpilot_solids1_trim150_scaffold_631_curated_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13418..14029)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1L7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93358.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Xaa-Pro aminopeptidase
scnpilot_solids1_trim150_scaffold_631_curated_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14094..14456)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1L8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93359.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_631_curated_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14535..15275)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W148_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93189.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_631_curated_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15670..16710
DNA (1041bp) protein (347aa)
Homoserine O-acetyltransferase {ECO:0000256|SAAS:SAAS00070949}; EC=2.3.1.- {ECO:0000256|SAAS:SAAS00276255};; EC=2.3.1.31 {ECO:0000256|SAAS:SAAS00070942};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
homoserine acetyltransferase (EC:2.3.1.31)
Homoserine O-acetyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W149_9GAMM
scnpilot_solids1_trim150_scaffold_631_curated_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16811..18001
DNA (1191bp) protein (397aa)
Cystathionine gamma-synthase {ECO:0000313|EMBL:EIL93191.1}; EC=2.5.1.48 {ECO:0000313|EMBL:EIL93191.1};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
O-succinylhomoserine (thiol)-lyase (EC:2.5.1.48)
Cystathionine gamma-synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W150_9GAMM
scnpilot_solids1_trim150_scaffold_631_curated_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17998..19080
DNA (1083bp) protein (361aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W151_9GAMM
scnpilot_solids1_trim150_scaffold_631_curated_16
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19316..19501
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2RTT0_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KGI78543.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_631_curated_17
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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19506..22391
DNA (2886bp) protein (962aa)
Lanthionine synthetase C family protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CQG3_MYXFH
Lanthionine synthetase C family protein {ECO:0000313|EMBL:AEI66695.1}; TaxID=483219 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus (strain ATCC BAA-855 / HW-1).;"
Lanthionine synthetase C family protein
scnpilot_solids1_trim150_scaffold_631_curated_18
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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22394..24313
DNA (1920bp) protein (640aa)
ABC transporter related protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CQG4_MYXFH
ABC transporter; K06147 ATP-binding cassette, subfamily B, bacterial
ABC transporter related protein {ECO:0000313|EMBL:AEI66696.1}; TaxID=483219 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus (strain ATCC BAA-855 / HW-1).;"
scnpilot_solids1_trim150_scaffold_631_curated_19
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(24417..25013)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W152_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93193.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_631_curated_20
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25160..25888)
DNA (729bp) protein (243aa)
Amino acid transporter n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W153_9GAMM
Amino acid transporter {ECO:0000313|EMBL:EIL93194.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
amino acid-polyamine-organocation superfamily protein
Displaying 20 items

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