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scnpilot_solids1_trim150_scaffold_622_curated

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_622_curated_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..876)
DNA (876bp) protein (292aa)
PhoH family protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W430_9GAMM
PhoH family protein {ECO:0000313|EMBL:EIL94221.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
PhoH family protein
scnpilot_solids1_trim150_scaffold_622_curated_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(931..1392)
DNA (462bp) protein (154aa)
Peroxiredoxin n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W429_9GAMM
Peroxiredoxin {ECO:0000313|EMBL:EIL94220.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Peroxiredoxin
scnpilot_solids1_trim150_scaffold_622_curated_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1646..2209)
DNA (564bp) protein (188aa)
Glycine cleavage system transcriptional repressor n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W428_9GAMM
Glycine cleavage system transcriptional repressor {ECO:0000313|EMBL:EIL94219.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
glycine cleavage system regulatory protein
scnpilot_solids1_trim150_scaffold_622_curated_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2318..3232
DNA (915bp) protein (305aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
dihydrodipicolinate synthase (EC:4.2.1.52)
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W427_9GAMM
scnpilot_solids1_trim150_scaffold_622_curated_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3268..3858
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W426_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94217.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_622_curated_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3931..4254)
DNA (324bp) protein (108aa)
Ferredoxin n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W425_9GAMM
Ferredoxin {ECO:0000313|EMBL:EIL94216.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ferredoxin
scnpilot_solids1_trim150_scaffold_622_curated_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4582..6087
DNA (1506bp) protein (502aa)
Poly(A) polymerase I {ECO:0000256|HAMAP-Rule:MF_00957}; Short=PAP I {ECO:0000256|HAMAP-Rule:MF_00957};; EC=2.7.7.19 {ECO:0000256|HAMAP-Rule:MF_00957};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Poly(A) polymerase I n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W424_9GAMM
poly(A) polymerase
scnpilot_solids1_trim150_scaffold_622_curated_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6084..6563
DNA (480bp) protein (160aa)
7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W423_9GAMM
7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase {ECO:0000313|EMBL:EIL94214.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
scnpilot_solids1_trim150_scaffold_622_curated_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6619..7449
DNA (831bp) protein (277aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopantoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ketopantoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W422_9GAMM
scnpilot_solids1_trim150_scaffold_622_curated_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7499..8344
DNA (846bp) protein (282aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
pantothenate synthetase (EC:6.3.2.1)
Pantothenate synthetase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W421_9GAMM
scnpilot_solids1_trim150_scaffold_622_curated_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8449..8841
DNA (393bp) protein (131aa)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
L-aspartate 1-decarboxylase (EC:4.1.1.11)
Aspartate 1-decarboxylase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W420_9GAMM
scnpilot_solids1_trim150_scaffold_622_curated_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9043..10137)
DNA (1095bp) protein (365aa)
Epoxyqueuosine reductase {ECO:0000256|HAMAP-Rule:MF_00916}; EC=1.17.99.6 {ECO:0000256|HAMAP-Rule:MF_00916};; Queuosine biosynthesis protein QueG {ECO:0000256|HAMAP-Rule:MF_00916}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Epoxyqueuosine reductase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W419_9GAMM
iron-sulfur cluster binding protein, putative
scnpilot_solids1_trim150_scaffold_622_curated_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10153..11652
DNA (1500bp) protein (500aa)
YjeF-like protein, hydroxyethylthiazole kinase-related protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W418_9GAMM
YjeF-like protein, hydroxyethylthiazole kinase-related protein {ECO:0000313|EMBL:EIL94209.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
yjeF-like protein, hydroxyethylthiazole kinase-related protein
scnpilot_solids1_trim150_scaffold_622_curated_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11633..12121
DNA (489bp) protein (163aa)
ADP-binding protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W417_9GAMM
ADP-binding protein {ECO:0000313|EMBL:EIL94208.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ATPase, YjeE family
scnpilot_solids1_trim150_scaffold_622_curated_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12289..13788
DNA (1500bp) protein (500aa)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W416_9GAMM
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:EIL94207.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
N-acetylmuramoyl-L-alanine amidase
scnpilot_solids1_trim150_scaffold_622_curated_16
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13832..15643
DNA (1812bp) protein (604aa)
DNA mismatch repair protein MutL n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W415_9GAMM
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
DNA mismatch repair protein MutL
scnpilot_solids1_trim150_scaffold_622_curated_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15678..16586
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W414_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94205.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_622_curated_18
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16570..17478
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W413_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94204.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_622_curated_19
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17509..18291)
DNA (783bp) protein (261aa)
3-hydroxybutyryl-CoA dehydratase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W412_9GAMM
3-hydroxybutyryl-CoA dehydratase {ECO:0000313|EMBL:EIL94203.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
enoyl-CoA hydratase/carnithine racemase
scnpilot_solids1_trim150_scaffold_622_curated_20
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18451..19179
DNA (729bp) protein (243aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W411_9GAMM
FKBP-type peptidyl-prolyl cis-trans isomerase
scnpilot_solids1_trim150_scaffold_622_curated_21
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19207..19410
DNA (204bp) protein (68aa)
Nudix hydrolase family transmembrane protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WPR1_9GAMM
nudix hydrolase family transmembrane protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_622_curated_22
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19407..20012
DNA (606bp) protein (202aa)
NTP pyrophosphohydrolase n=1 Tax=Rhodanobacter denitrificans RepID=I4WPR0_9GAMM
NTP pyrophosphohydrolase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_622_curated_23
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20009..20863
DNA (855bp) protein (285aa)
Rhodanese-related sulfurtransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W410_9GAMM
Rhodanese-related sulfurtransferase {ECO:0000313|EMBL:EIL94201.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
rhodanese-related sulfurtransferase
scnpilot_solids1_trim150_scaffold_622_curated_24
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20935..21693)
DNA (759bp) protein (253aa)
Enoyl-CoA hydratase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W409_9GAMM
Enoyl-CoA hydratase {ECO:0000313|EMBL:EIL94200.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
enoyl-CoA hydratase/carnithine racemase
scnpilot_solids1_trim150_scaffold_622_curated_25
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21713..23164)
DNA (1452bp) protein (484aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W408_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94199.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_622_curated_26
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23373..25058
DNA (1686bp) protein (562aa)
Beta-lactamase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W407_9GAMM
Beta-lactamase {ECO:0000313|EMBL:EIL94198.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
beta-lactamase
scnpilot_solids1_trim150_scaffold_622_curated_27
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25109..25564)
DNA (456bp) protein (152aa)
4-hydroxybenzoyl-CoA thioesterase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W406_9GAMM
4-hydroxybenzoyl-CoA thioesterase {ECO:0000313|EMBL:EIL94197.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative thioesterase
scnpilot_solids1_trim150_scaffold_622_curated_28
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25561..26154)
DNA (594bp) protein (198aa)
UvrABC system protein A n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W405_9GAMM
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Excinuclease ABC subunit A
Displaying 28 items

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