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scnpilot_solids1_trim150_scaffold_1737_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1737_curated_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..2008
DNA (2007bp) protein (669aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W445_9GAMM
scnpilot_solids1_trim150_scaffold_1737_curated_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2273..2476
DNA (204bp) protein (68aa)
Carbon storage regulator homolog n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W444_9GAMM
Carbon storage regulator homolog {ECO:0000256|HAMAP-Rule:MF_00167, ECO:0000256|SAAS:SAAS00093889}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
carbon storage regulator CsrA
scnpilot_solids1_trim150_scaffold_1737_curated_3
unknown

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comp(2607..3317)
DNA (711bp) protein (237aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1737_curated_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3479..4210)
DNA (732bp) protein (244aa)
UDP-2,3-diacylglucosamine hydrolase {ECO:0000256|HAMAP-Rule:MF_00575, ECO:0000256|SAAS:SAAS00063966}; EC=3.6.1.54 {ECO:0000256|HAMAP-Rule:MF_00575, ECO:0000256|SAAS:SAAS00063978};; UDP-2,3-diacylglucosamine diphosphatase {ECO:0000256|HAMAP-Rule:MF_00575}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
UDP-2,3-diacylglucosamine hydrolase (EC:3.6.1.-)
UDP-2,3-diacylglucosamine hydrolase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W443_9GAMM
scnpilot_solids1_trim150_scaffold_1737_curated_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4218..4949)
DNA (732bp) protein (244aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W442_9GAMM
Peptidyl-prolyl cis-trans isomerase {ECO:0000313|EMBL:EIL94233.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
scnpilot_solids1_trim150_scaffold_1737_curated_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5013..6530)
DNA (1518bp) protein (506aa)
Exopolyphosphatase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W441_9GAMM
Exopolyphosphatase {ECO:0000313|EMBL:EIL94232.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
exopolyphosphatase
scnpilot_solids1_trim150_scaffold_1737_curated_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6609..8702)
DNA (2094bp) protein (698aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00347}; Polyphosphoric acid kinase {ECO:0000256|HAMAP-Rule:MF_00347}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Polyphosphate kinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W440_9GAMM
polyphosphate kinase 1
scnpilot_solids1_trim150_scaffold_1737_curated_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8757..10004)
DNA (1248bp) protein (416aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Phosphate regulon sensor kinase PhoR n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W439_9GAMM
phosphate regulon sensor kinase PhoR
scnpilot_solids1_trim150_scaffold_1737_curated_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10089..10778)
DNA (690bp) protein (230aa)
Phosphate regulon transcriptional regulatory protein PhoB n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W438_9GAMM
Phosphate regulon transcriptional regulatory protein PhoB {ECO:0000313|EMBL:EIL94229.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
phosphate regulon transcriptional regulatory protein PhoB
scnpilot_solids1_trim150_scaffold_1737_curated_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10852..12471)
DNA (1620bp) protein (540aa)
Putative beta-barrel assembly-enhancing protease {ECO:0000256|HAMAP-Rule:MF_00997}; EC=3.4.-.- {ECO:0000256|HAMAP-Rule:MF_00997};; Flags: Precursor;; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Putative Zn-dependent protease n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W437_9GAMM
putative Zn-dependent protease
scnpilot_solids1_trim150_scaffold_1737_curated_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12598..12861
DNA (264bp) protein (88aa)
Glutaredoxin n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W436_9GAMM
Glutaredoxin {ECO:0000313|EMBL:EIL94227.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Glutaredoxin, GrxC family
scnpilot_solids1_trim150_scaffold_1737_curated_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12858..13235
DNA (378bp) protein (126aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W435_9GAMM
alkylhydroperoxidase AhpD family core domain protein
scnpilot_solids1_trim150_scaffold_1737_curated_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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13444..13917
DNA (474bp) protein (158aa)
Isocitrate dehydrogenase {ECO:0000313|EMBL:EIL94225.1}; EC=1.1.1.41 {ECO:0000313|EMBL:EIL94225.1};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Isocitrate dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W434_9GAMM
isocitrate/isopropylmalate dehydrogenase
Displaying 13 items

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