ggKbase home page

scnpilot_solids1_trim150_scaffold_446_curated_13

Organism: solids_Rhodanobacter_5

partial RP 37 / 55 MC: 2 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: comp(15764..18883)

Top 3 Functional Annotations

Value Algorithm Source
Heavy metal efflux pump CzcA n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1X3_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 99.2
  • Coverage: 999.99
  • Bit_score: 1987
  • Evalue 0.0
Heavy metal efflux pump CzcA {ECO:0000313|EMBL:EIL93464.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.2
  • Coverage: 999.99
  • Bit_score: 1987
  • Evalue 0.0
heavy metal efflux pump, cobalt-zinc-cadmium similarity KEGG
DB: KEGG
  • Identity: 94.4
  • Coverage: 999.99
  • Bit_score: 1913
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3120
ATGAGCGAGCACCTGCCGTCCATGCCGCCGCGCGCGGCGTCGCTGATGAACCGGCTCGTCGGCGCCTCGCTGGCGCAGCGTTTCCTGGTTGCGCTGCTGGTGCTGGTGCTCGTCGGTGCGGGCGTGCATGCGCTGCACCGGCTGCCGGTGGATGCGTATCCCGACCTGTCGCCGCCCAGCGTGGAGATCGTCACCCAATGGCCCGGCCACACCGCCGAGGAAGTGGAACGGCTGATCACGGTGCCGGCCGAGCAGGGCATGACCGGCATTCCGAGGACCGACAACGTCCGCTCGATTTCGCTGTACGGCCTGTCGGTGGTCACGCTCACCTTCGACAACGGCACCGACAATTATTTCGCGCGCCAGCAGGTGTTCAACCGGCTCGGCGACCTCGACCTGCCCGACGGGGTGAAGCCGTCGGTGTCGCCGTTGTCGTCGCCGTCGGGGCTGATCTATCGCTATGTGCTGCAAAGCTCCGACCGCTCGCCGATGGAGCTGAAGACCTTCGAGGACTGGGTGGTCGAGCCGCAGTACCGCGCCGTGGCGGGCGTGGCCGATGACTCCGGTTTCGGCGGCGGCAGCATGCAGTACCAGGTGTTGCTGGACCCGGCGAAGATCGCCGGGGTCGGGCTCACCGCGCAGCAGGTGCAGGCCGCGCTGGCCGCCAACAACGGCAACGCCGGCGGCGGCTTCTACGCGCAGGGCGGCCAGTTCTACTACGTGCGTGGCGTGGGCCGGCTGCAGACGCTGGAGGACATCGGCAACGTGGTGCTGGCCGTGCACGACGGTAATCCGGTGCTGGTGAAGGACGTCGGCCGCGTGGTGATCGGCGTCGCGCCGCGGCTGGGCCAGTTCGGCTTCGAGCAGCAGAACGACGCGGTCGAGGGCGTGATCTCGCTGCGCACCGGCGAGAAGACCCAGGACGTGCTGAAGCGGGTCGAGGCGAAGACGAAGGAACTCAACGAACAGATCCTGCCGAAGGACATCAAGGTCCATCCGTTCTACGACCGCAGCGATCTCGTCGCGGTGACCACCCAGGTGGTCAGGGACAACCTGCTGCGCGGCATGCTGCTGGTCGTGGTGGTGCTGATCTTCTTCCTCTACGACGTGCGCGCCGGGCTGATCGTGGCGGTCACCATCCCGCTGTCGCTGCTGGTCGCCTTCATCGGGCTGGACCTGCAGGGCGCGTCGGCCAACCTGTTGTCGATCGGCGCGATCGACTTCGGCATCCTGGTCGACGCGGCGGTGGTGATGGTGGAGAACATCCACCGCCAGCTCGCCGATCGCGAAGGCACGAAGTTCAACCTGATCGAGGTGATCCGCGACGCGGCGGCCGAAGTCGATCGCCCGCTGTTCTACGCGGTGGCGGTGATCGTGGTCAGCTTCCTGCCGATCTACGTGCTGTCCGGCCCGTCCGGCACGCTGTTCAAGCCGATGGCCGACACCATGGTGTTCGCACTGATCGGTTCGCTGGTGGTCACCCTGACCTTGCTGCCGGTGCTGTGCTCGTGGCTGATGCGCAAGGGCGTGCGAGAACGGCGCAACCGCGCGTTCGAGGCGATCAGGTCGGTCTACATCCGGGGACTGGACTTCTGCCTGGCCCGGGTGTGGCTCACCACGATCGCCTCGGCCCTGCTGCTGGGGCTGTCGCTGCTGCTGATCCCGCGCATCGGCGCGGAGTTCATGCCGCACCTGGACGAGGGCGCGCTGTGGGTGCGCGCGACCATGCCGTACACCATCTCGTTCGACGAGTCGGCGAAGATCACCCCGCAGATCCGCGACATCCTGCGTTCGTTCCCCCAGGTCACCACGGTGGCCTCGGAGCTGGGCCGGCCCGACGACGGCACCGACTCCACCGGCTTCTTCAACGTCGAGTTCTACGTCGGGCTGAAGCCGTATTCGCAGTGGACCGGAAAATACCGCAACAAGGCCGAGCTGACCGCGGCGATCAACCAGAAGCTGCAGAGCTTCCCCGGCATCACCTTCAACCACACCCAGCCGGCCGAGGATGCGGTGGACGAAGCCGAGACCGGCCTGAAGAGCGCGCTGGCGGTGAAGGTGTTCGGCCCCGACCTCGACACGCTGCAGGCCAGGGGCAAGGCGATCAAGCACGTGCTGGAACAGGTGCGCGGCATCCGCGACGTGACCCTGGTGCAGGAGCTGGGCCAGCCCAGCCTCAGCATTCGCATCAAGCGCGCGGCGATCGCCCGCTACGGCCTCAACGTGGACGACATCAACGGCCTGATCCAGACCGCCATCGGCGGCGACGTGGCGACCGAAGTAATCCAGGGCGAGAAGCAGTTCGACCTGGTGGTGCGGCTGGACCGGCAGTATCGCGACAACGCCGAGGCGATCGGCAACATCCTGGTGGCCACGCCGGGCGGCCAGCAGCTGCCGCTGAAGGAATTCGCCGATATCGAGGTGACCAACGGCGCCTCCTTCATCTACCGGCAGGACAACTCGCGTTACATCGGCGTGCAGTTCTCGGTGGAAGGCCGCGACCTGGCCGGCGCGGTGGAGGACGCGATCGCCCAGGTCAAGGCGAAAGTGAAACTGCAGCAGGGCTACCGGCTGGACTGGGGCGGCGAGTACAAGGAATACACCGCCTCGCGCGCACAACTGAACCTGATCGTGCCGCTCACCGTGGGGCTGATCTTCCTGCTGCTGTTCACCCTGTACAGCAACTTCAAGTTTCCGTTCATCACCGTGCTCGGCGTGGTGCTGTCCGCGCCGGCCGGCGGCATCATCGCGCTGTGGCTCACCGGCACGCCGTTCTCGGTGTCGTCGGGGATCGGCTTCCTCGCGCTGTTCGGCGTCTCGGTGCAGACCGCCGTGGTGTACATCTCCTACGTCAACGAACTGCGCCGCAACGGCGTCGAGGTGGCCGAGGCGATCCGCGAAGGCGCGATCCTGCGCCTGCGCCCGATCATGATGACGGCGCTGGTGGCGGCGCTGGGCCTGTTGCCGGCGGCGCTGGCCACCGGCGTGGGCACCGACACGCAGCGGCCGTTCGCCCTGGTCATCGTCAGCGGCCTGTTCACCCGCCTGCTGATCAGCGTGTTCCTGATGCCGGCGCTGTACTCGCTGGTGGCGCGGCCGGGCGACCGGCTGGAAGTGTGA
PROTEIN sequence
Length: 1040
MSEHLPSMPPRAASLMNRLVGASLAQRFLVALLVLVLVGAGVHALHRLPVDAYPDLSPPSVEIVTQWPGHTAEEVERLITVPAEQGMTGIPRTDNVRSISLYGLSVVTLTFDNGTDNYFARQQVFNRLGDLDLPDGVKPSVSPLSSPSGLIYRYVLQSSDRSPMELKTFEDWVVEPQYRAVAGVADDSGFGGGSMQYQVLLDPAKIAGVGLTAQQVQAALAANNGNAGGGFYAQGGQFYYVRGVGRLQTLEDIGNVVLAVHDGNPVLVKDVGRVVIGVAPRLGQFGFEQQNDAVEGVISLRTGEKTQDVLKRVEAKTKELNEQILPKDIKVHPFYDRSDLVAVTTQVVRDNLLRGMLLVVVVLIFFLYDVRAGLIVAVTIPLSLLVAFIGLDLQGASANLLSIGAIDFGILVDAAVVMVENIHRQLADREGTKFNLIEVIRDAAAEVDRPLFYAVAVIVVSFLPIYVLSGPSGTLFKPMADTMVFALIGSLVVTLTLLPVLCSWLMRKGVRERRNRAFEAIRSVYIRGLDFCLARVWLTTIASALLLGLSLLLIPRIGAEFMPHLDEGALWVRATMPYTISFDESAKITPQIRDILRSFPQVTTVASELGRPDDGTDSTGFFNVEFYVGLKPYSQWTGKYRNKAELTAAINQKLQSFPGITFNHTQPAEDAVDEAETGLKSALAVKVFGPDLDTLQARGKAIKHVLEQVRGIRDVTLVQELGQPSLSIRIKRAAIARYGLNVDDINGLIQTAIGGDVATEVIQGEKQFDLVVRLDRQYRDNAEAIGNILVATPGGQQLPLKEFADIEVTNGASFIYRQDNSRYIGVQFSVEGRDLAGAVEDAIAQVKAKVKLQQGYRLDWGGEYKEYTASRAQLNLIVPLTVGLIFLLLFTLYSNFKFPFITVLGVVLSAPAGGIIALWLTGTPFSVSSGIGFLALFGVSVQTAVVYISYVNELRRNGVEVAEAIREGAILRLRPIMMTALVAALGLLPAALATGVGTDTQRPFALVIVSGLFTRLLISVFLMPALYSLVARPGDRLEV*