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scnpilot_solids1_trim150_scaffold_446_curated

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_446_curated_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..804)
DNA (804bp) protein (268aa)
Chloromuconate cycloisomerase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1W1_9GAMM
Chloromuconate cycloisomerase {ECO:0000313|EMBL:EIL93452.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
enolase superfamily enzyme related to L-alanine-DL-glutamate epimerase
scnpilot_solids1_trim150_scaffold_446_curated_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(853..2256)
DNA (1404bp) protein (468aa)
NLP/P60 protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1W2_9GAMM
NLP/P60 protein {ECO:0000313|EMBL:EIL93453.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
cell wall-associated hydrolase, invasion-associated protein
scnpilot_solids1_trim150_scaffold_446_curated_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2283..3434)
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1W3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93454.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative integral membrane protein
scnpilot_solids1_trim150_scaffold_446_curated_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3600..5126
DNA (1527bp) protein (509aa)
Transglutaminase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1W4_9GAMM
Transglutaminase {ECO:0000313|EMBL:EIL93455.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
transglutaminase-like enzyme, predicted cysteine protease
scnpilot_solids1_trim150_scaffold_446_curated_5
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5180..8209
DNA (3030bp) protein (1010aa)
Oar protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VRQ3_9GAMM
Oar protein {ECO:0000313|EMBL:EIL89894.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
outer membrane receptor protein
scnpilot_solids1_trim150_scaffold_446_curated_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8415..9611
DNA (1197bp) protein (399aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Diaminopimelate decarboxylase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1W6_9GAMM
diaminopimelate decarboxylase
scnpilot_solids1_trim150_scaffold_446_curated_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9608..10819
DNA (1212bp) protein (404aa)
Membrane dipeptidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1W7_9GAMM
Membrane dipeptidase {ECO:0000313|EMBL:EIL93458.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Zn-dependent dipeptidase, microsomal dipeptidase
scnpilot_solids1_trim150_scaffold_446_curated_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10806..12404
DNA (1599bp) protein (533aa)
Beta-lactamase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1W8_9GAMM
Beta-lactamase {ECO:0000313|EMBL:EIL93459.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
penicillin-binding protein, beta-lactamase class C
scnpilot_solids1_trim150_scaffold_446_curated_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12401..13108
DNA (708bp) protein (236aa)
D-alanyl-D-alanine dipeptidase {ECO:0000256|HAMAP-Rule:MF_01924, ECO:0000256|PIRNR:PIRNR026671}; Short=D-Ala-D-Ala dipeptidase {ECO:0000256|HAMAP-Rule:MF_01924, ECO:0000256|PIRNR:PIRNR026671};; EC=3.4.13.22 {ECO:0000256|HAMAP-Rule:MF_01924, ECO:0000256|PIRNR:PIRNR026671};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Peptidase M15D vanX D-ala-D-ala dipeptidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1W9_9GAMM
D-Ala-D-Ala dipeptidase vanX
scnpilot_solids1_trim150_scaffold_446_curated_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13140..14195
DNA (1056bp) protein (352aa)
Beta-lactamase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1X0_9GAMM
Beta-lactamase {ECO:0000313|EMBL:EIL93461.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
penicillin-binding protein, beta-lactamase class C
scnpilot_solids1_trim150_scaffold_446_curated_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14195..14962
DNA (768bp) protein (256aa)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1X1_9GAMM
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:EIL93462.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
negative regulator of beta-lactamase expression
scnpilot_solids1_trim150_scaffold_446_curated_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14952..15692)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1X2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93463.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_446_curated_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15764..18883)
DNA (3120bp) protein (1040aa)
Heavy metal efflux pump CzcA n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1X3_9GAMM
Heavy metal efflux pump CzcA {ECO:0000313|EMBL:EIL93464.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
heavy metal efflux pump, cobalt-zinc-cadmium
scnpilot_solids1_trim150_scaffold_446_curated_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18880..20055)
DNA (1176bp) protein (392aa)
Secretion protein HlyD n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1X4_9GAMM
Secretion protein HlyD {ECO:0000313|EMBL:EIL93465.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
RND family efflux transporter, MFP subunit
scnpilot_solids1_trim150_scaffold_446_curated_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20052..21566)
DNA (1515bp) protein (505aa)
Heavy metal cation tricomponent efflux outer membrane porin ZneC n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1X5_9GAMM
Heavy metal cation tricomponent efflux outer membrane porin ZneC {ECO:0000313|EMBL:EIL93466.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
efflux transporter, outer membrane factor lipoprotein, NodT family
scnpilot_solids1_trim150_scaffold_446_curated_16
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21809..22120
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1X7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93468.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids1_trim150_scaffold_446_curated_17
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22152..22868)
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI00037A33DB
Uncharacterized protein {ECO:0000313|EMBL:KGI76915.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
hypothetical protein; K09807 hypothetical protein
scnpilot_solids1_trim150_scaffold_446_curated_18
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22897..24423)
DNA (1527bp) protein (509aa)
Anthranilate synthase component I {ECO:0000313|EMBL:EIL93469.1}; EC=4.1.3.27 {ECO:0000313|EMBL:EIL93469.1};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
anthranilate synthase component I (EC:4.1.3.27)
Anthranilate synthase component I n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1X8_9GAMM
scnpilot_solids1_trim150_scaffold_446_curated_19
unknown

Not on your lists

24657..25598
DNA (942bp) protein (314aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_446_curated_20
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25620..27644)
DNA (2025bp) protein (675aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Signal transduction histidine kinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1X9_9GAMM
signal transduction histidine kinase
scnpilot_solids1_trim150_scaffold_446_curated_21
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27672..28250)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1Y0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93471.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_446_curated_22
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28250..28939)
DNA (690bp) protein (230aa)
Proteobacterial dedicated sortase system response regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1Y1_9GAMM
Proteobacterial dedicated sortase system response regulator {ECO:0000313|EMBL:EIL93472.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
two component transcriptional regulator, winged helix family
scnpilot_solids1_trim150_scaffold_446_curated_23
unknown

Not on your lists

29114..29227
DNA (114bp) protein (38aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NKB0_9GAMM
hypothetical protein
scnpilot_solids1_trim150_scaffold_446_curated_24
unknown

Not on your lists

29256..29387
DNA (132bp) protein (44aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_446_curated_25
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29585..31546
DNA (1962bp) protein (654aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1Y2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93473.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Vault protein inter-alpha-trypsin
scnpilot_solids1_trim150_scaffold_446_curated_26
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31543..32184
DNA (642bp) protein (214aa)
sortase family protein, Peptidase C60; K07284 sortase A [EC:3.4.22.70]
Sortase family protein, Peptidase C60 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1Y3_9GAMM
Sortase family protein, Peptidase C60 {ECO:0000313|EMBL:EIL93474.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids1_trim150_scaffold_446_curated_27
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32329..33060)
DNA (732bp) protein (244aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ribulose-5-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1Y4_9GAMM
scnpilot_solids1_trim150_scaffold_446_curated_28
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33209..34021)
DNA (813bp) protein (271aa)
Protein with DnaJ-like domain n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1Y5_9GAMM
Protein with DnaJ-like domain {ECO:0000313|EMBL:EIL93476.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
protein with DnaJ-like domain
scnpilot_solids1_trim150_scaffold_446_curated_29
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34018..34344)
DNA (327bp) protein (109aa)
Cytochrome c553 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1Y6_9GAMM
Cytochrome c553 {ECO:0000313|EMBL:EIL93477.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
cytochrome c553
scnpilot_solids1_trim150_scaffold_446_curated_30
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34469..35365
DNA (897bp) protein (299aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1Y7_9GAMM
phosphoribosylaminoimidazole-succinocarboxamide synthase
Displaying items 1-30 of 34 in total

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