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scnpilot_solids1_trim150_scaffold_256_curated_12

Organism: solids_Rhodanobacter_5

partial RP 37 / 55 MC: 2 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: comp(9292..9873)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase D {ECO:0000256|PIRNR:PIRNR004553}; EC=2.1.1.171 {ECO:0000256|PIRNR:PIRNR004553};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.4
  • Coverage: 193.0
  • Bit_score: 382
  • Evalue 3.20e-103
RsmD family RNA methyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0C0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 98.4
  • Coverage: 193.0
  • Bit_score: 382
  • Evalue 2.30e-103
16S rRNA m(2)G-966 methyltransferase similarity KEGG
DB: KEGG
  • Identity: 80.3
  • Coverage: 193.0
  • Bit_score: 313
  • Evalue 4.10e-83

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 582
ATGAACGGGTCACGCAAGGCCGGCCCGGGGCGGGTGCGCATCATCGGCGGCAGCCTGCGCAATTCGCGGCTGGAGGTGCCGGATCTGCCCGGGCTGCGGCCCACCGCCGAGCGCGTGCGCGAGACCCTGTTCAACTGGCTGGCACCGGTCATCGAGGGCATGGACTGCCTGGATCTGTGCGCGGGCACCGGCGCGCTGGGGATCGAGGCGCTCTCGCGGGGCGCCGCGTCGGTGCAGTTCGTCGAACGCGATGCCCGCGCGGCGCAGGCACTGCGGGCAAACCTGGTGCGGCTGAAGGCGGACCAGGCTCGGGTGAACGTCACCGACGCCGGCAGCTTCCTGCAGCAGGCCAGCCGGGCCCACGACCTGGTTTTCCTCGACCCGCCGTTCGCGCTGGACCTGTGGGCGGTGCTGGCCGGGCAACTGGAACGGGGCGGCTGGTTGGCCGCGCGCGCATGGATCTACGTGGAATCGCCCCGCGCCGTGGTGCCCGACCTGCCGCCGAACTGGCAACTGCACCGCGAAGGCCATGCCGGCGAGGTGCGTTTTGCGCTCTATCGGCGTGCGCTTCCGTTAAGCTAG
PROTEIN sequence
Length: 194
MNGSRKAGPGRVRIIGGSLRNSRLEVPDLPGLRPTAERVRETLFNWLAPVIEGMDCLDLCAGTGALGIEALSRGAASVQFVERDARAAQALRANLVRLKADQARVNVTDAGSFLQQASRAHDLVFLDPPFALDLWAVLAGQLERGGWLAARAWIYVESPRAVVPDLPPNWQLHREGHAGEVRFALYRRALPLS*