ggKbase home page

scnpilot_solids1_trim150_scaffold_256_curated

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_256_curated_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..406
DNA (405bp) protein (135aa)
Phosphate starvation-inducible protein PhoH n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0D1_9GAMM
Phosphate starvation-inducible protein PhoH {ECO:0000313|EMBL:EIL92922.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
phosphate starvation-inducible protein PhoH, predicted ATPase
scnpilot_solids1_trim150_scaffold_256_curated_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

403..864
DNA (462bp) protein (154aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Endoribonuclease YbeY n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0D0_9GAMM
metalloprotein, YbeY/UPF0054 family
scnpilot_solids1_trim150_scaffold_256_curated_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1089..1928
DNA (840bp) protein (280aa)
Putative Mg2+ and Co2+ transporter CorC n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0C9_9GAMM
Putative Mg2+ and Co2+ transporter CorC {ECO:0000313|EMBL:EIL92920.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative Mg2+ and Co2+ transporter CorC
scnpilot_solids1_trim150_scaffold_256_curated_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2001..3203
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0C8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92919.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_256_curated_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3237..4265
DNA (1029bp) protein (343aa)
Magnesium Mg(2+) and cobalt Co(2+) transport protein CorA n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0C7_9GAMM
Magnesium Mg(2+) and cobalt Co(2+) transport protein CorA {ECO:0000313|EMBL:EIL92918.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Mg2+/Co2+ transporter
scnpilot_solids1_trim150_scaffold_256_curated_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4351..4932
DNA (582bp) protein (194aa)
NTP pyrophosphohydrolase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0C6_9GAMM
NTP pyrophosphohydrolase {ECO:0000313|EMBL:EIL92917.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
NTP pyrophosphohydrolase
scnpilot_solids1_trim150_scaffold_256_curated_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4943..5992)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0C5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92916.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Protein of unknown function (DUF1625)
scnpilot_solids1_trim150_scaffold_256_curated_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6094..7812)
DNA (1719bp) protein (573aa)
gamma-glutamyltransferase 1 (EC:2.3.2.2)
Gamma-glutamyltranspeptidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0C4_9GAMM
Gamma-glutamyltranspeptidase {ECO:0000313|EMBL:EIL92915.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids1_trim150_scaffold_256_curated_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7809..8102)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0C3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92914.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_256_curated_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8215..8718)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0C2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92913.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_256_curated_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8711..9262)
DNA (552bp) protein (184aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
pantetheine-phosphate adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0C1_9GAMM
scnpilot_solids1_trim150_scaffold_256_curated_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9292..9873)
DNA (582bp) protein (194aa)
Ribosomal RNA small subunit methyltransferase D {ECO:0000256|PIRNR:PIRNR004553}; EC=2.1.1.171 {ECO:0000256|PIRNR:PIRNR004553};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
RsmD family RNA methyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0C0_9GAMM
16S rRNA m(2)G-966 methyltransferase
scnpilot_solids1_trim150_scaffold_256_curated_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9963..11102
DNA (1140bp) protein (380aa)
Signal recognition particle receptor FtsY n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0B9_9GAMM
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
signal recognition particle-docking protein FtsY
scnpilot_solids1_trim150_scaffold_256_curated_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11126..12214
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0B8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92909.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
uncharacterized protein involved in outer membrane biogenesis
scnpilot_solids1_trim150_scaffold_256_curated_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12211..13302
DNA (1092bp) protein (364aa)
A/G-specific DNA-adenine glycosylase (EC:3.2.2.-)
A/G-specific adenine glycosylase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0B7_9GAMM
A/G-specific adenine glycosylase {ECO:0000313|EMBL:EIL92908.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids1_trim150_scaffold_256_curated_16
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13340..13618
DNA (279bp) protein (93aa)
Probable Fe(2+)-trafficking protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0B6_9GAMM
Probable Fe(2+)-trafficking protein {ECO:0000256|HAMAP-Rule:MF_00686, ECO:0000256|SAAS:SAAS00073862}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Fe-S cluster protector protein
scnpilot_solids1_trim150_scaffold_256_curated_17
unknown

Not on your lists

14122..14418
DNA (297bp) protein (99aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_256_curated_18
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14537..14830
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0B5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92906.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_256_curated_19
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14909..16561
DNA (1653bp) protein (551aa)
Peptidase m28 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0B4_9GAMM
Peptidase m28 {ECO:0000313|EMBL:EIL92905.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative aminopeptidase
scnpilot_solids1_trim150_scaffold_256_curated_20
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16633..18255)
DNA (1623bp) protein (541aa)
Alpha-glucosidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0B3_9GAMM
Alpha-glucosidase {ECO:0000313|EMBL:EIL92904.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
glycosidase
scnpilot_solids1_trim150_scaffold_256_curated_21
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18635..21538
DNA (2904bp) protein (968aa)
TonB-dependent receptor n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0B2_9GAMM
TonB-dependent receptor {ECO:0000313|EMBL:EIL92903.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
btuB; TonB-dependent receptor
scnpilot_solids1_trim150_scaffold_256_curated_22
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21789..23372
DNA (1584bp) protein (528aa)
Alpha-amylase {ECO:0000256|RuleBase:RU361134}; EC=3.2.1.1 {ECO:0000256|RuleBase:RU361134};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Alpha amylase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0B1_9GAMM
glycosidase
scnpilot_solids1_trim150_scaffold_256_curated_23
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23414..25777
DNA (2364bp) protein (788aa)
Alpha-glucosidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0B0_9GAMM
Alpha-glucosidase {ECO:0000313|EMBL:EIL92901.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
family 31 glycosyl hydrolase, alpha-glucosidase
scnpilot_solids1_trim150_scaffold_256_curated_24
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25905..27455
DNA (1551bp) protein (517aa)
Xylan 1,4-beta-xylosidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0A9_9GAMM
Xylan 1,4-beta-xylosidase {ECO:0000313|EMBL:EIL92900.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
beta-xylosidase
scnpilot_solids1_trim150_scaffold_256_curated_25
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27495..29075)
DNA (1581bp) protein (527aa)
Tryptophan halogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0A8_9GAMM
Tryptophan halogenase {ECO:0000313|EMBL:EIL92899.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
tryptophan halogenase
scnpilot_solids1_trim150_scaffold_256_curated_26
unknown

Not on your lists

29144..29248
DNA (105bp) protein (35aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_256_curated_27
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29245..31653
DNA (2409bp) protein (803aa)
TonB-dependent receptor plug n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0A7_9GAMM
TonB-dependent receptor plug {ECO:0000313|EMBL:EIL92898.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
TonB-dependent receptor-like protein
scnpilot_solids1_trim150_scaffold_256_curated_28
unknown

Not on your lists

comp(31778..31939)
DNA (162bp) protein (54aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_256_curated_29
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32074..34632)
DNA (2559bp) protein (853aa)
glycosidase; K01188 beta-glucosidase [EC:3.2.1.21]
Glucan 1,4-beta-glucosidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0A6_9GAMM
Glucan 1,4-beta-glucosidase {ECO:0000313|EMBL:EIL92897.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids1_trim150_scaffold_256_curated_30
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34921..35931)
DNA (1011bp) protein (337aa)
LacI family transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0A5_9GAMM
LacI family transcriptional regulator {ECO:0000313|EMBL:EIL92896.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator
Displaying items 1-30 of 42 in total

View Taxonomy