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scnpilot_solids1_trim150_scaffold_252_curated_46

Organism: solids_Rhodanobacter_5

partial RP 37 / 55 MC: 2 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: 44381..45733

Top 3 Functional Annotations

Value Algorithm Source
Type II and III secretion system protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W207_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 450.0
  • Bit_score: 881
  • Evalue 4.80e-253
Type II and III secretion system protein {ECO:0000313|EMBL:EIL93498.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 450.0
  • Bit_score: 881
  • Evalue 6.70e-253
type II and III secretion system protein; K02280 pilus assembly protein CpaC similarity KEGG
DB: KEGG
  • Identity: 66.1
  • Coverage: 437.0
  • Bit_score: 584
  • Evalue 2.20e-164

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1353
ATGGAAGCAGGCAAACATTCCGGCCGGGCGACGGCGACCTTTCTGGCATGGCTGGCGCTGTGCGCCGCGGCGCTCGCGCTGCCGTTGCGCGAGGCGCGCGCGACCTCCCCGGTGATCGGCGATTCGCTCAGCATGTACGCGGGACAGGCGCTGGTGCAGAGCGCGCCCGGCCCGCTCAAGCGGGTCGCGGTGGGCGACGGCAAGCTGCTGCAGGTCAAGGCGATCGGCAGCCGCGAGCTGGTGCTGATCGCGAACCAGCCCGGCGACACCTCGGTGCAGTTGTGGATGGCCGACGGCAGCCAGCGCAGCGTCAGCGTGCACGTGGTGGTGGGCAACAGCGCCGAAGCGGCCGGGATGGTCGAGCGCCTGCTGGGCGAGGACAGCGCGATCTCGGTCGCCACCGTGGGCGGCAACGTGGTGCTGACCGGCAGTGACCTGTCGCAGGCGGACATGGCGCACATCGCGGCGATCAGGAAGATCTACCCGCAGGTGCTCGACTTCACCAGCGCGAACGCGGTGGAGATGAAGCCCACCGTGATGATGCGCGTGCGCATCATGGAGTTCGACAAGAAGGCGATCAACCAGCTCGGCATCAAGTGGGACAGCATGATCGCCGGCCCCGGCGGCGGCCTGGTGCATGACTGGGTCACCAATCCTTACTACCGGATGACCCCGCAGGGCTTCGCCGGCATCGGCGCCGACGGCGGCCCGGCCAACCTGCCGCTGCGGGTGCCCGGCACGCCGTCGTACTTCGGCATCGCCACCTCGATCGCCTCGCAGATCAACCTGATGATGCAGGACGGCAACGCGTGGGAACTCGCCGCGCCGCAGCTGTCCGCCCGCAGCGGCGGCGTTGCCGATTTCCTGGTCGGCGGCGAGGTGCCGATCCCGATCAGCCAGGGCCTGGGCGAAACCACGGTCGAGTACAAGCAGTACGGCATCAAGTTGCACATCGCGCCGGTGGTCAACAGCAAGGGCGACATCTCCACCGACATCGAGACCGAGATCAGCAAGATCGATCCCAGCGTCAACGTGCAGGGCTATCCCGGCTTCATCACCCGCCGTGCCAGCGCGCAGCTCAATGTGCACGAGGGCGACACCATCGTGATCTCGGGCCTGGTCGACGCCAGCGCCTCGAAGACCTTCGACAAGGTCCCCGGGCTGGGGGACATCCCGGTGCTGGGCGCGCTGTTCCGCTCGCGCGACTTCCAGCGCAATCGCACCGACCTGGTGATCTTCGTGACGCCGATCGTGATCACCCCCGACTCGCCGGAGAACCGCGAACTGATCGAGAAGAGCGACCGCCTGCGCGACGACTTCCGCAAGGTCGCCGGCAAGGACATCGTGGATTGA
PROTEIN sequence
Length: 451
MEAGKHSGRATATFLAWLALCAAALALPLREARATSPVIGDSLSMYAGQALVQSAPGPLKRVAVGDGKLLQVKAIGSRELVLIANQPGDTSVQLWMADGSQRSVSVHVVVGNSAEAAGMVERLLGEDSAISVATVGGNVVLTGSDLSQADMAHIAAIRKIYPQVLDFTSANAVEMKPTVMMRVRIMEFDKKAINQLGIKWDSMIAGPGGGLVHDWVTNPYYRMTPQGFAGIGADGGPANLPLRVPGTPSYFGIATSIASQINLMMQDGNAWELAAPQLSARSGGVADFLVGGEVPIPISQGLGETTVEYKQYGIKLHIAPVVNSKGDISTDIETEISKIDPSVNVQGYPGFITRRASAQLNVHEGDTIVISGLVDASASKTFDKVPGLGDIPVLGALFRSRDFQRNRTDLVIFVTPIVITPDSPENRELIEKSDRLRDDFRKVAGKDIVD*