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scnpilot_solids1_trim150_scaffold_320_curated_19

Organism: solids_Rhodanobacter_5

partial RP 37 / 55 MC: 2 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: comp(16985..17704)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.3
  • Coverage: 239.0
  • Bit_score: 466
  • Evalue 2.10e-128
Pseudouridine synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2Z3_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 98.3
  • Coverage: 239.0
  • Bit_score: 466
  • Evalue 1.50e-128
pseudouridine synthase family protein similarity KEGG
DB: KEGG
  • Identity: 92.5
  • Coverage: 239.0
  • Bit_score: 441
  • Evalue 1.60e-121

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 720
ATGCGCGTCAACAAATACATCAGCGAAGCCGGCCTCTGTTCGCGCCGTGAGGCGGACGAGTTGTTGCTGGCCGGTCGGGTCAGCATCAACGGCGAAGTGGTCACGACCGGCGCGAAGGCACTGGAGGGCGACGAGGTGCGCGTGGATGGCGAGATCGTCAAGGCGCGCATCCTCGCTGCCACGCCGGCGGCAAAGAAGGCGATCTATATCGCGCTGAACAAGCCGGTAGGGATCACCTGCACCACCGACCAGGGCGTGGACGGCAACATCGTGGATTTCATCGACCATCCGCAGCGGATCTTTCCGATCGGCCGGCTGGACAAGGATTCCGAAGGGCTGATCCTGCTGACCAGCAATGGCGACATCGTCAACGAGATCCTGCGTGCGGAGAACCACCACGAGAAGGAATATCTGGTCGGCGTGAACAAGGCGGTGACCGACGAATTCCTGGCCGGCATGAGCAAGGGCGTGCGCATCCACGGCCAGATGACCCAGCGTTGCCGCGTGCGCCGGATCGCCAAGTTCGGCTTCTCGATCGTGCTGACCCAGGGCCTCAACCGGCAGATCCGCCTGATGGCCGCCGCCTTCGACTACCGGGTGACCCAGCTGCGCCGCGTGCGCATCGACAACGTCAAGCTGGCCCATCTGAAACCCGGCCAGTGGCGCAACCTCACCGAAGCGGAGCTGAAGGGGCTGTTGCCGGGGCGTACGCAGTGGTGA
PROTEIN sequence
Length: 240
MRVNKYISEAGLCSRREADELLLAGRVSINGEVVTTGAKALEGDEVRVDGEIVKARILAATPAAKKAIYIALNKPVGITCTTDQGVDGNIVDFIDHPQRIFPIGRLDKDSEGLILLTSNGDIVNEILRAENHHEKEYLVGVNKAVTDEFLAGMSKGVRIHGQMTQRCRVRRIAKFGFSIVLTQGLNRQIRLMAAAFDYRVTQLRRVRIDNVKLAHLKPGQWRNLTEAELKGLLPGRTQW*