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scnpilot_solids1_trim150_scaffold_320_curated

Search features with annotation key words

Displaying items 1-30 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_320_curated_1
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(155..1480)
DNA (1326bp) protein (442aa)
fliI; flagellum-specific ATP synthase FliI (EC:3.6.3.14); K02412 flagellum-specific ATP synthase [EC:3.6.3.14]
ATPase, FliI/YscN family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7V3_9BRAD
ATPase, FliI/YscN family {ECO:0000313|EMBL:EFI51313.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
scnpilot_solids1_trim150_scaffold_320_curated_2
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1903..2604
DNA (702bp) protein (234aa)
Cell cycle response regulator CtrA n=1 Tax=Afipia felis ATCC 53690 RepID=K8NLD5_AFIFE
ctrA; cell cycle response regulator; K13584 two-component system, cell cycle response regulator CtrA
Cell cycle response regulator CtrA {ECO:0000313|EMBL:EKS29239.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
scnpilot_solids1_trim150_scaffold_320_curated_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2701..2916)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W311_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93852.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Protein of unknown function (DUF2909)
scnpilot_solids1_trim150_scaffold_320_curated_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2976..3740
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W310_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93851.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_320_curated_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3737..4309
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W309_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93850.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_320_curated_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4309..5484
DNA (1176bp) protein (392aa)
Cytochrome oxidase assembly protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W308_9GAMM
Cytochrome oxidase assembly protein {ECO:0000313|EMBL:EIL93849.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
uncharacterized protein required for cytochrome oxidase assembly
scnpilot_solids1_trim150_scaffold_320_curated_7
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5487..6389
DNA (903bp) protein (301aa)
Protoheme IX farnesyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WHC3_9GAMM
protoheme IX farnesyltransferase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_320_curated_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6689..6919
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W304_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93845.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids1_trim150_scaffold_320_curated_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7100..9733
DNA (2634bp) protein (878aa)
Magnesium-transporting ATPase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W303_9GAMM
Magnesium-transporting ATPase {ECO:0000313|EMBL:EIL93844.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
magnesium-translocating P-type ATPase
scnpilot_solids1_trim150_scaffold_320_curated_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10014..11015)
DNA (1002bp) protein (334aa)
Sodium/bile acid symporter family protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W302_9GAMM
Sodium/bile acid symporter family protein {ECO:0000313|EMBL:EIL93843.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative Na+-dependent transporter
scnpilot_solids1_trim150_scaffold_320_curated_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11025..11693)
DNA (669bp) protein (223aa)
DedA protein family n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W301_9GAMM
DedA protein family {ECO:0000313|EMBL:EIL93842.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative membrane-associated protein
scnpilot_solids1_trim150_scaffold_320_curated_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11776..13512)
DNA (1737bp) protein (579aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
DNA primase (EC:2.7.7.-)
DNA primase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W300_9GAMM
scnpilot_solids1_trim150_scaffold_320_curated_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13601..14239
DNA (639bp) protein (213aa)
Acetyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2Z9_9GAMM
Acetyltransferase {ECO:0000313|EMBL:EIL93840.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
acetyltransferase
scnpilot_solids1_trim150_scaffold_320_curated_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14236..14406)
DNA (171bp) protein (57aa)
UPF0391 membrane protein UU7_06933 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2Z8_9GAMM
UPF0391 membrane protein UU7_06933 {ECO:0000256|HAMAP-Rule:MF_01361}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Protein of unknown function (DUF1328)
scnpilot_solids1_trim150_scaffold_320_curated_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14552..14848
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2Z7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93838.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_320_curated_16
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14873..15319)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2Z6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93837.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_320_curated_17
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15522..15737)
DNA (216bp) protein (72aa)
30S ribosomal protein S21 n=4 Tax=Rhodanobacter RepID=I4WHW5_9GAMM
SSU ribosomal protein S21P
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_320_curated_18
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


15839..16870
DNA (1032bp) protein (344aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00195365}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammapr
O-sialoglycoprotein endopeptidase (EC:3.4.24.57)
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2Z4_9GAMM
scnpilot_solids1_trim150_scaffold_320_curated_19
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16985..17704)
DNA (720bp) protein (240aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Pseudouridine synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2Z3_9GAMM
pseudouridine synthase family protein
scnpilot_solids1_trim150_scaffold_320_curated_20
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17848..18624)
DNA (777bp) protein (259aa)
Inner membrane transport permease n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2Z2_9GAMM
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ABC-type polysaccharide/polyol phosphate export systems, permease component
scnpilot_solids1_trim150_scaffold_320_curated_21
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18621..19583)
DNA (963bp) protein (321aa)
Multidrug ABC transporter ATPase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2Z1_9GAMM
Multidrug ABC transporter ATPase {ECO:0000313|EMBL:EIL93832.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ABC-type multidrug transport system, ATPase component
scnpilot_solids1_trim150_scaffold_320_curated_22
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19689..20450
DNA (762bp) protein (254aa)
Phenol hydroxylase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2Z0_9GAMM
Phenol hydroxylase {ECO:0000313|EMBL:EIL93831.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
flavodoxin reductase family protein
scnpilot_solids1_trim150_scaffold_320_curated_23
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20480..23281)
DNA (2802bp) protein (934aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2Y9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93830.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_320_curated_24
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23278..29070)
DNA (5793bp) protein (1931aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2Y8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93829.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_320_curated_25
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29200..30333)
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2Y7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93828.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_320_curated_26
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30676..31170)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2Y6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93827.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_320_curated_27
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31181..32413)
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2Y5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93826.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_320_curated_28
unknown

Not on your lists

32960..33301
DNA (342bp) protein (114aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_320_curated_29
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33605..34669)
DNA (1065bp) protein (355aa)
hypothetical protein n=1 Tax=Burkholderia glumae RepID=UPI0002D2EC3E
Uncharacterized protein {ECO:0000313|EMBL:AHX16468.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
fimbria adhesin protein
scnpilot_solids1_trim150_scaffold_320_curated_30
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34725..37487)
DNA (2763bp) protein (921aa)
P pilus assembly protein, porin PapC (Fragment) n=1 Tax=Rhodanobacter sp. 115 RepID=I4VK97_9GAMM
P pilus assembly protein, porin PapC {ECO:0000313|EMBL:EIL87638.1}; Flags: Fragment;; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
P pilus assembly protein, porin PapC
Displaying items 1-30 of 76 in total

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