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scnpilot_solids1_trim150_scaffold_320_curated_30

Organism: solids_Rhodanobacter_5

partial RP 37 / 55 MC: 2 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: comp(34725..37487)

Top 3 Functional Annotations

Value Algorithm Source
P pilus assembly protein, porin PapC (Fragment) n=1 Tax=Rhodanobacter sp. 115 RepID=I4VK97_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 63.6
  • Coverage: 887.0
  • Bit_score: 1125
  • Evalue 0.0
P pilus assembly protein, porin PapC {ECO:0000313|EMBL:EIL87638.1}; Flags: Fragment;; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.6
  • Coverage: 887.0
  • Bit_score: 1125
  • Evalue 0.0
P pilus assembly protein, porin PapC similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 878.0
  • Bit_score: 825
  • Evalue 2.00e-236

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Taxonomy

Rhodanobacter sp. 115 → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2763
ATGAAGCGGCAACGCACGCGCTCCAGCCACGCCCCGACGCGCCAAGCTGCGCTCGCGCTGGCCTGTGGCATGGCGCTTGCCGGCTCCATGGGATGGCCTCGCCAGACGCTGGCCGCGGCCTCGGGCGCAGCTCCTGGCGGCGCGAGCGCCGATGCCAGCGCGGGAGCCAGCGGCGGCTTCGCCAGTTTCGACCGCAGCATGCTGGCCGGTACCGGCGACAACACCACCGACCTGAGCCGTTTCGAACACGGCAACCCGGTACTGCCAGGCATCTACAACCTGGATGTCTATCTCGGCAAGAACTGGGTCGGCCGCATGGACGTGCGATTCGCCGCGCCATCACCCAATACCAGCGCCGTGCCATGCGTGACCTCCGACCTGCTCGATCGCCTCGGCCTTGAGCCCACCACATCCGTGGCACATCCTGGATCCTCCACCGCCTGCGTGAACCTGGCCGATCTGATTCCCGGAGCCACGCTGTCTTTCGACATGCCGAACCTGCGTCTGGATGCCAGCGTACCTCAGGCATACATGAACCTCAGGCCGCGCGGCTGGATCAATCCAGCATCCTGGGACGCGGGCGTGCCGGCGCTCCTGCTCAACTACAATTTCAACAGTTACCGCACCACCAGCGGCGGACAAGGCCAGACCAGCACTTACCTGGGGCTTCGATCCGGCTTGAACGTCGGCCCATGGCAGCTGCGGCAGGACAGCACGGCAACCTGGCAGTCCGGCGTCGCCGGCCGGCCGGCTCAACGCCACTGGCAGAACATTGACACCTACGTGCAGCGGGCCCTTCCCAGCTGGAGTGCCATGCTGAACCTGGGCGACAGCTACACCGATGGCTCCGTGTTCAACAGCTACGGCTTGCGCGGCGTGCAACTGGGTACCGACGATCGCATGCTGCCACAGTCGCTGCGTGGCTATGCTCCGATCGTACGCGGTGTCGCCTACACCAATGCCAAGGTCACGGTGTCCCAGAATGGCGTGCAGATCTACCAGACCACCGTCGCACCCGGTCCGTTCGTGATCAACGATCTCTACCCCACCGGTTACGGCGGCGACCTGGATGTGGTGGTAACGGAAGCCGATGGTCGCCAGCACAGCCTTACGGTGCCCTACGCCTCGGTGGCGCAGCTGATGCGCCCCGGCGTCACCCGCTTCGACATCGCCGCCGGCCAGTTGCGCGACTCGGCTCTGCACGACAAGCCCGGCGTAATCCAGGCCGCAGCGCAACACGGCTTCAACAACCGCTTCACTGGCTACGCCGGCGTGCAGGGTTCCGTCGGCTACGCCGCGGTGCTGGTCGGCGGAGCGTTGAACACGCGCTTTGGCGCGCTGGCGCTGGACGTCACCCAGGCCCATGCGATCATCCCGGGCGACGGTGCCCACGACGGCCAGAGCTATCGCATCACCTACAGCAAGATCATCCCGGAAACCGATACCTCGTTCAGCGTGGTGGCCAACCGCTATTCCACCAGCGGCTTCCTGAGCCTGAACGATGCCGAGTTTGCACGCGACTACGCGCGGCGCGGCCTGAACGCCCTGCAACACCTGCCGTCCAATGTGCAGACCATTGACGGCGTGCCCGTGCAAAGCCTGCTCACGCCTGCGCAGCTCGCGGCGTTGAACGGCACCGCCTACAACAGCCGTGACCTCTATGTCTCGCGCGGTCTGCTGCAACAGCGCAACCGCTTCACCCTGACGCTCAGCCAGCAGTTGGGGCAAAACGGCAGCTCGCTCTATGCCAATGCCACCGTCAACGATTACTGGAACCGCCGCGGCAGCGACAGCCAGTTCCAGGTTGGCTACAACAGCCATTTCCGCCGCCTGGCCTGGAGCGTGTCCGTCAGCCGTGGGCGCACGGAGTTCAGCGGGAACGACAATCAGATTTTCTTCAACGCAAGCCTGCCGCTGGGTAGCACTTCGCACGCGCCCAGCCTCTCGTTCAACGCCAACCACGACAACAACGCCGGCACTCAGGAACAGGCCACCGTCAACGGTACGCTGGGCCAGTGGAACCAGTTCAACTACGGCGCCTCCGCCTCGCATGGCGACAACGGCAACGCCTTCAGCGTAACCTCCGGCTACAGCAGTTCTTACGCCACATTCAACGCCAGCGTCGGCCACGGCAGGGACTACTCGCAGGCGTCCTTCAACGCCGGCGGCGCAGTGGTCGCCCACCGTGGCGGCATCACCTTCGGCCCACCAACCGGCGACACCGTCGCCATCGTGCACGCACCCGGTGCGGACGGTGCGCACATCACCAATGCGCCAGGCCTCAGCGTCGGCCGCTCCGGCTATGCGCTGGTGCCCTACCTCACGCCCTATCAGCTCGACACCATCCAGATCGACCCGCAAGGCCTGCCGTTGGGCGTCCAGCTGGACGCCACCAGCGCCCAGGTGGTGCCTTATGCTGGCGCGGTGGTGATGGTGGATTTCAAGAGCAAGACCGGCCGTGCGCTGATTGCGCGCATCCGCATGTCCGACGGCAAGCCGGCGCCGTTCGGTGCGGAGGTATTCGACGCCAACGATGAACCGCTTGGCGTGGTCGGGCAAGGTGGCCTGAGTCTGCTGCGCGGCGCCAGGCAAAAAGGTCGTCTCAGCCTAAAGTGGCTGGACGCCCAGGAAGCGGCCCGGGTGTGCTCGTTTGATTACGCGGTTCCTGTCTCGAGTCGGGACGTACAGGATCACCCTCCCATCGATGTAACCTGCTCCCCGGATGGCCAAATCCCGCCGACGCGTGGGGTGAGTACACCGTGA
PROTEIN sequence
Length: 921
MKRQRTRSSHAPTRQAALALACGMALAGSMGWPRQTLAAASGAAPGGASADASAGASGGFASFDRSMLAGTGDNTTDLSRFEHGNPVLPGIYNLDVYLGKNWVGRMDVRFAAPSPNTSAVPCVTSDLLDRLGLEPTTSVAHPGSSTACVNLADLIPGATLSFDMPNLRLDASVPQAYMNLRPRGWINPASWDAGVPALLLNYNFNSYRTTSGGQGQTSTYLGLRSGLNVGPWQLRQDSTATWQSGVAGRPAQRHWQNIDTYVQRALPSWSAMLNLGDSYTDGSVFNSYGLRGVQLGTDDRMLPQSLRGYAPIVRGVAYTNAKVTVSQNGVQIYQTTVAPGPFVINDLYPTGYGGDLDVVVTEADGRQHSLTVPYASVAQLMRPGVTRFDIAAGQLRDSALHDKPGVIQAAAQHGFNNRFTGYAGVQGSVGYAAVLVGGALNTRFGALALDVTQAHAIIPGDGAHDGQSYRITYSKIIPETDTSFSVVANRYSTSGFLSLNDAEFARDYARRGLNALQHLPSNVQTIDGVPVQSLLTPAQLAALNGTAYNSRDLYVSRGLLQQRNRFTLTLSQQLGQNGSSLYANATVNDYWNRRGSDSQFQVGYNSHFRRLAWSVSVSRGRTEFSGNDNQIFFNASLPLGSTSHAPSLSFNANHDNNAGTQEQATVNGTLGQWNQFNYGASASHGDNGNAFSVTSGYSSSYATFNASVGHGRDYSQASFNAGGAVVAHRGGITFGPPTGDTVAIVHAPGADGAHITNAPGLSVGRSGYALVPYLTPYQLDTIQIDPQGLPLGVQLDATSAQVVPYAGAVVMVDFKSKTGRALIARIRMSDGKPAPFGAEVFDANDEPLGVVGQGGLSLLRGARQKGRLSLKWLDAQEAARVCSFDYAVPVSSRDVQDHPPIDVTCSPDGQIPPTRGVSTP*