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scnpilot_solids1_trim150_scaffold_539_curated_1

Organism: solids_Rhodanobacter_5

partial RP 37 / 55 MC: 2 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: 1..489

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoH n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VZU0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 162.0
  • Bit_score: 321
  • Evalue 6.90e-85
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 162.0
  • Bit_score: 321
  • Evalue 9.70e-85
alternative sigma factor RpoH similarity KEGG
DB: KEGG
  • Identity: 92.6
  • Coverage: 162.0
  • Bit_score: 300
  • Evalue 2.30e-79

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 489
ATCGTGAAGGTCGCCACCACCAAGGCGCAGCGCAAGCTGTTCTTCAACCTGCGCAAGAGCAAGAAGCGCCTGGGCTGGATGAACGCGGCGGAAGTCAGCACGGTGGCGAAGGATCTGGGCGTGCCCGAGGCCACGGTGCGCGAGATGGAATCGCGCCTGTCCGGCCGCGACATCGGTTTCGAGGCTCCGGCCGACGCCGATGACGACGCCAAGCCGGCTCCGGCGGCGTTCCTGATCGACGACGGTGCCGATCCGTACGAGAACGTGGCCGACGAGGACTACGCCGACAACCAGATGCAGACGCTGACCGATGCGCTGAGCCATCTGGACAAGCGTTCGCGCGACATCATCCAGCGCCGCTGGCTGGATGGCGACAACAAGGCCACGCTGCAGGATCTGGCCGACGAGTACGGCGTCTCCGCCGAGCGCATCCGCCAGGTCGAGGCGAACGCGATGAAGAAGATGCGCGGCTTGTTCGCCACGGCTTGA
PROTEIN sequence
Length: 163
IVKVATTKAQRKLFFNLRKSKKRLGWMNAAEVSTVAKDLGVPEATVREMESRLSGRDIGFEAPADADDDAKPAPAAFLIDDGADPYENVADEDYADNQMQTLTDALSHLDKRSRDIIQRRWLDGDNKATLQDLADEYGVSAERIRQVEANAMKKMRGLFATA*