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scnpilot_solids1_trim150_scaffold_539_curated

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Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_539_curated_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..489
DNA (489bp) protein (163aa)
RNA polymerase sigma factor RpoH n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VZU0_9GAMM
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
alternative sigma factor RpoH
scnpilot_solids1_trim150_scaffold_539_curated_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(585..1958)
DNA (1374bp) protein (458aa)
C-terminal processing peptidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VZT9_9GAMM
C-terminal processing peptidase {ECO:0000313|EMBL:EIL92730.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
C-terminal processing peptidase
scnpilot_solids1_trim150_scaffold_539_curated_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2090..3385)
DNA (1296bp) protein (432aa)
Membrane-bound metallopeptidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VZT8_9GAMM
Membrane-bound metallopeptidase {ECO:0000313|EMBL:EIL92729.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
membrane-bound metallopeptidase
scnpilot_solids1_trim150_scaffold_539_curated_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3399..4175
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VZT7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92728.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_539_curated_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4283..5971
DNA (1689bp) protein (563aa)
DNA ligase B {ECO:0000256|HAMAP-Rule:MF_01587, ECO:0000256|SAAS:SAAS00019096}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01587, ECO:0000256|SAAS:SAAS00019091};; Polydeoxyribonucleotide synthase [NAD(+)] B {ECO:0000256|HAMAP-Rule:MF_01587}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
DNA ligase B n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VZT6_9GAMM
NAD-dependent DNA ligase
scnpilot_solids1_trim150_scaffold_539_curated_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5975..6376)
DNA (402bp) protein (134aa)
UPF0225 protein UU7_15735 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VTS6_9GAMM
UPF0225 protein UU7_15735 {ECO:0000256|HAMAP-Rule:MF_00612}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_539_curated_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6571..7164)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VTS5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90616.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative S-adenosylmethionine-dependent methyltransferase
scnpilot_solids1_trim150_scaffold_539_curated_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7177..7374)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VTS4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90615.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_539_curated_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7457..8011)
DNA (555bp) protein (185aa)
Histidine utilization protein HutD n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VTS3_9GAMM
Histidine utilization protein HutD {ECO:0000313|EMBL:EIL90614.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_539_curated_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8008..10125)
DNA (2118bp) protein (706aa)
ATP-dependent DNA helicase DinG n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VTS2_9GAMM
ATP-dependent DNA helicase DinG {ECO:0000313|EMBL:EIL90613.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
DNA helicase, Rad3
scnpilot_solids1_trim150_scaffold_539_curated_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10343..13294
DNA (2952bp) protein (984aa)
Gaf domain/ggdef domain/eal domain protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VTS1_9GAMM
Gaf domain/ggdef domain/eal domain protein {ECO:0000313|EMBL:EIL90612.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
diguanylate cyclase (GGDEF) domain-containing protein
scnpilot_solids1_trim150_scaffold_539_curated_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13304..13957)
DNA (654bp) protein (218aa)
DSBA oxidoreductase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VTS0_9GAMM
DSBA oxidoreductase {ECO:0000313|EMBL:EIL90611.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative dithiol-disulfide isomerase involved in polyketide biosynthesis
scnpilot_solids1_trim150_scaffold_539_curated_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14036..15679)
DNA (1644bp) protein (548aa)
NAD(FAD)-utilizing dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VTR9_9GAMM
NAD(FAD)-utilizing dehydrogenase {ECO:0000313|EMBL:EIL90610.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
FAD-dependent dehydrogenase
scnpilot_solids1_trim150_scaffold_539_curated_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15767..16273)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VTR8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90609.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_539_curated_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16270..17637)
DNA (1368bp) protein (456aa)
Drug:H+ antiporter-1 family protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VTR7_9GAMM
Drug:H+ antiporter-1 family protein {ECO:0000313|EMBL:EIL90608.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
arabinose efflux permease family protein
scnpilot_solids1_trim150_scaffold_539_curated_16
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17780..19501
DNA (1722bp) protein (574aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VTR6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90607.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Peptidase family M49
scnpilot_solids1_trim150_scaffold_539_curated_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19550..20380)
DNA (831bp) protein (277aa)
Lipase LipA (L.pneumophila) n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VTR5_9GAMM
Lipase LipA (L.pneumophila) {ECO:0000313|EMBL:EIL90606.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative hydrolase or acyltransferase of alpha/beta superfamily
scnpilot_solids1_trim150_scaffold_539_curated_18
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20373..21560)
DNA (1188bp) protein (396aa)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607};; Heme synthase {ECO:0000256|HAMAP-Rule:MF_00323}; Protoheme ferro-lyase {ECO:0000256|HAMAP-Rule:MF_00323}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ferrochelatase (EC:4.99.1.1)
Ferrochelatase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VTR4_9GAMM
scnpilot_solids1_trim150_scaffold_539_curated_19
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21639..22328
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VTR3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90604.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_539_curated_20
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22389..22628
DNA (240bp) protein (80aa)
Sec-independent protein translocase protein TatA n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VTR2_9GAMM
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
twin arginine-targeting protein translocase, TatA/E family
scnpilot_solids1_trim150_scaffold_539_curated_21
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22646..23095
DNA (450bp) protein (150aa)
Sec-independent protein translocase protein TatB n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VTR1_9GAMM
Sec-independent protein translocase protein TatB {ECO:0000256|HAMAP-Rule:MF_00237, ECO:0000256|SAAS:SAAS00028234}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
twin arginine-targeting protein translocase TatB
scnpilot_solids1_trim150_scaffold_539_curated_22
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23082..23831
DNA (750bp) protein (250aa)
Sec-independent protein translocase protein TatC n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VTR0_9GAMM
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
twin arginine targeting protein translocase subunit TatC
scnpilot_solids1_trim150_scaffold_539_curated_23
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23848..26022)
DNA (2175bp) protein (725aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Primosome assembly protein PriA n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VTQ9_9GAMM
replication restart DNA helicase PriA
scnpilot_solids1_trim150_scaffold_539_curated_24
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26410..27612)
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VTQ8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90599.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Protein of unknown function (DUF3667)
scnpilot_solids1_trim150_scaffold_539_curated_25
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27720..29105
DNA (1386bp) protein (462aa)
Putative efflux protein, MATE family n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VTQ7_9GAMM
Putative efflux protein, MATE family {ECO:0000313|EMBL:EIL90598.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative efflux protein, MATE family
scnpilot_solids1_trim150_scaffold_539_curated_26
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29152..31011
DNA (1860bp) protein (620aa)
Protease 4 {ECO:0000256|PIRNR:PIRNR001217}; EC=3.4.21.- {ECO:0000256|PIRNR:PIRNR001217};; Endopeptidase IV {ECO:0000256|PIRNR:PIRNR001217}; Protease IV {ECO:0000256|PIRNR:PIRNR001217}; Signal peptide peptidase {ECO:0000256|PIRNR:PIRNR001217}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Signal peptide peptidase SppA, 67K type n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VTQ6_9GAMM
signal peptide peptidase SppA, 67K type
scnpilot_solids1_trim150_scaffold_539_curated_27
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31029..31232)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VTQ5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90596.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_539_curated_28
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31335..32117
DNA (783bp) protein (261aa)
Tropinone reductase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VTQ4_9GAMM
Tropinone reductase {ECO:0000313|EMBL:EIL90595.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
scnpilot_solids1_trim150_scaffold_539_curated_29
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32158..33123)
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VTQ3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90594.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
EDD domain protein, DegV family
scnpilot_solids1_trim150_scaffold_539_curated_30
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33298..34089
DNA (792bp) protein (264aa)
AMP nucleosidase {ECO:0000313|EMBL:EIL90593.1}; EC=3.2.2.4 {ECO:0000313|EMBL:EIL90593.1};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
AMP nucleosidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VTQ2_9GAMM
AMP nucleosidase, putative
Displaying items 1-30 of 42 in total

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