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scnpilot_solids1_trim150_scaffold_866_curated

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_866_curated_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..533)
DNA (531bp) protein (177aa)
Phosphate starvation-inducible protein PhoH n=1 Tax=Rhodanobacter denitrificans RepID=I4WYF1_9GAMM
phosphate starvation-inducible protein PhoH, predicted ATPase
Phosphate starvation-inducible protein PhoH, predicted ATPase {ECO:0000313|EMBL:AGG90027.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_866_curated_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

634..1308
DNA (675bp) protein (225aa)
Regulatory protein TetR n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0D2_9GAMM
Regulatory protein TetR {ECO:0000313|EMBL:EIL92923.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
transcriptional regulator
scnpilot_solids1_trim150_scaffold_866_curated_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1305..2273
DNA (969bp) protein (323aa)
Multidrug resistance efflux pump n=1 Tax=Rhodanobacter denitrificans RepID=M4NGG4_9GAMM
multidrug resistance efflux pump
Multidrug resistance efflux pump {ECO:0000313|EMBL:AGG90025.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_866_curated_4
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2270..3214
DNA (945bp) protein (315aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WYF4_9GAMM
ABC-type multidrug transport system, ATPase component
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_866_curated_5
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3211..4320
DNA (1110bp) protein (370aa)
ABC-type multidrug transport system, permease component n=1 Tax=Rhodanobacter denitrificans RepID=M4NK37_9GAMM
ABC-type multidrug transport system, permease component
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_866_curated_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4348..4839)
DNA (492bp) protein (164aa)
Histone acetyltransferase HPA11 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0D6_9GAMM
Histone acetyltransferase HPA11 {ECO:0000313|EMBL:EIL92927.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
acetyltransferase
scnpilot_solids1_trim150_scaffold_866_curated_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4836..6188)
DNA (1353bp) protein (451aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rho
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Rhodanobacter denitrificans RepID=M4NR22_9GAMM
tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
scnpilot_solids1_trim150_scaffold_866_curated_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6376..7527
DNA (1152bp) protein (384aa)
Lytic murein transglycosylase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0D8_9GAMM
Lytic murein transglycosylase {ECO:0000313|EMBL:EIL92929.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
soluble lytic murein transglycosylase-like protein
scnpilot_solids1_trim150_scaffold_866_curated_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7552..8736)
DNA (1185bp) protein (395aa)
Trypsin-like serine protease with C-terminal PDZ domain n=1 Tax=Rhodanobacter denitrificans RepID=I4WYF9_9GAMM
trypsin-like serine protease with C-terminal PDZ domain
Trypsin-like serine protease with C-terminal PDZ domain {ECO:0000313|EMBL:AGG90019.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_866_curated_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8900..9496
DNA (597bp) protein (199aa)
Ubiquinol-cytochrome c reductase iron-sulfur subunit {ECO:0000256|RuleBase:RU004494}; EC=1.10.2.2 {ECO:0000256|RuleBase:RU004494};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Ubiquinol-cytochrome c reductase iron-sulfur subunit n=1 Tax=Rhodanobacter denitrificans RepID=I4WYG0_9GAMM
ubiquinol-cytochrome c reductase, iron-sulfur subunit
scnpilot_solids1_trim150_scaffold_866_curated_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9496..10818
DNA (1323bp) protein (441aa)
Cytochrome b n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0E1_9GAMM
Cytochrome b {ECO:0000256|RuleBase:RU003385}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
cytochrome b subunit of the bc complex
scnpilot_solids1_trim150_scaffold_866_curated_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10811..11572
DNA (762bp) protein (254aa)
Ubiquinol-cytochrome c reductase, cytochrome c1 subunit n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0E2_9GAMM
Ubiquinol-cytochrome c reductase, cytochrome c1 subunit {ECO:0000313|EMBL:EIL92933.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
cytochrome c1
scnpilot_solids1_trim150_scaffold_866_curated_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11643..12281
DNA (639bp) protein (213aa)
Stringent starvation protein A n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0E3_9GAMM
Stringent starvation protein A {ECO:0000313|EMBL:EIL92934.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
glutathione S-transferase
scnpilot_solids1_trim150_scaffold_866_curated_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12268..12723
DNA (456bp) protein (152aa)
ClpXP protease specificity-enhancing factor n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0E4_9GAMM
ClpXP protease specificity-enhancing factor {ECO:0000313|EMBL:EIL92935.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
stringent starvation protein B
scnpilot_solids1_trim150_scaffold_866_curated_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12786..13172)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0E5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92936.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Protein of unknown function (DUF3301)
scnpilot_solids1_trim150_scaffold_866_curated_16
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13242..14099)
DNA (858bp) protein (286aa)
nicotinate-nucleotide pyrophosphorylase (carboxylating) (EC:2.4.2.19)
Nicotinate-nucleotide pyrophosphorylase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0E6_9GAMM
Nicotinate-nucleotide pyrophosphorylase {ECO:0000313|EMBL:EIL92937.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids1_trim150_scaffold_866_curated_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14096..16378)
DNA (2283bp) protein (761aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0E7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92938.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Protein of unknown function (DUF1631)
scnpilot_solids1_trim150_scaffold_866_curated_18
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16501..16836)
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00037EA558
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_866_curated_19
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16850..17338
DNA (489bp) protein (163aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spat
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0E9_9GAMM
5-(carboxyamino)imidazole ribonucleotide mutase
scnpilot_solids1_trim150_scaffold_866_curated_20
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17335..18492
DNA (1158bp) protein (386aa)
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; EC=6.3.4.18 {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; 5-(carboxyamino)imidazole ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhoda
Phosphoribosylaminoimidazole carboxylase ATPase subunit n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0F0_9GAMM
5-(carboxyamino)imidazole ribonucleotide synthase
scnpilot_solids1_trim150_scaffold_866_curated_21
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18738..20240
DNA (1503bp) protein (501aa)
Inorganic anion transporter, SulP family protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0F1_9GAMM
Inorganic anion transporter, SulP family protein {ECO:0000313|EMBL:EIL92942.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
inorganic anion transporter, SulP family
scnpilot_solids1_trim150_scaffold_866_curated_22
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20314..20892)
DNA (579bp) protein (193aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Superoxide dismutase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0F2_9GAMM
superoxide dismutase
scnpilot_solids1_trim150_scaffold_866_curated_23
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21004..21327
DNA (324bp) protein (108aa)
Glutaredoxin n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0F3_9GAMM
Glutaredoxin {ECO:0000256|PIRNR:PIRNR005894}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
monothiol glutaredoxin, Grx4 family
scnpilot_solids1_trim150_scaffold_866_curated_24
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21330..22094
DNA (765bp) protein (255aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0F4_9GAMM
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EIL92945.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
scnpilot_solids1_trim150_scaffold_866_curated_25
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22153..22764
DNA (612bp) protein (204aa)
Membrane protein, MarC family n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0F5_9GAMM
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
multiple antibiotic transporter
scnpilot_solids1_trim150_scaffold_866_curated_26
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23233..26532
DNA (3300bp) protein (1100aa)
Oar protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0F6_9GAMM
Oar protein {ECO:0000313|EMBL:EIL92947.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_866_curated_27
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26662..28062
DNA (1401bp) protein (467aa)
Putative Rossmann fold nucleotide-binding protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0F7_9GAMM
Putative Rossmann fold nucleotide-binding protein {ECO:0000313|EMBL:EIL92948.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative Rossmann fold nucleotide-binding protein
scnpilot_solids1_trim150_scaffold_866_curated_28
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28424..29185
DNA (762bp) protein (254aa)
Crp/Fnr family transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0F8_9GAMM
Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:EIL92949.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
cAMP-binding protein
scnpilot_solids1_trim150_scaffold_866_curated_29
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29310..29696
DNA (387bp) protein (129aa)
Copper-containing nitrite reductase {ECO:0000313|EMBL:ADE28551.1}; EC=1.7.2.1 {ECO:0000313|EMBL:ADE28551.1};; Dissimilatory nitrite reductase (NO-forming), copper type apoprotein {ECO:0000313|EMBL:AGG89997.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Copper-containing nitrite reductase n=2 Tax=Rhodanobacter RepID=D5JAK6_9GAMM
dissimilatory nitrite reductase (NO-forming), copper type apoprotein
Displaying 29 items

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