ggKbase home page

scnpilot_solids1_trim150_scaffold_2119_curated

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2119_curated_1
unknown

Not on your lists

1..66
DNA (66bp) protein (22aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2119_curated_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(234..1139)
DNA (906bp) protein (302aa)
6-phosphogluconate dehydrogenase, decarboxylating (EC:1.1.1.44)
6-phosphogluconate dehydrogenase-like protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WEN5_9GAMM
6-phosphogluconate dehydrogenase-like protein {ECO:0000313|EMBL:EIL97926.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids1_trim150_scaffold_2119_curated_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1174..2508)
DNA (1335bp) protein (445aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NA67_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87289.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_2119_curated_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2651..4030)
DNA (1380bp) protein (460aa)
Nitrogen regulation protein NR(I) n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WEN2_9GAMM
Nitrogen regulation protein NR(I) {ECO:0000313|EMBL:EIL97923.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
nitrogen regulation protein NR(I)
scnpilot_solids1_trim150_scaffold_2119_curated_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4023..5033)
DNA (1011bp) protein (337aa)
signal transduction histidine kinase, nitrogen specific (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Signal transduction histidine kinase, nitrogen specific n=1 Tax=Rhodanobacter denitrificans RepID=I4WUT3_9GAMM
scnpilot_solids1_trim150_scaffold_2119_curated_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5266..5649
DNA (384bp) protein (128aa)
DnaK suppressor protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NA55_9GAMM
DnaK suppressor protein
DnaK suppressor protein {ECO:0000313|EMBL:AGG87285.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_2119_curated_7
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5676..6188
DNA (513bp) protein (171aa)
AhpC/TSA family protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDI4_9GAMM
Peroxiredoxin
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_2119_curated_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6188..6736
DNA (549bp) protein (183aa)
DSBA oxidoreductase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDI3_9GAMM
DSBA oxidoreductase {ECO:0000313|EMBL:EIL97524.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
protein-disulfide isomerase
scnpilot_solids1_trim150_scaffold_2119_curated_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6786..8045
DNA (1260bp) protein (420aa)
Amidohydrolase n=1 Tax=Rhodanobacter denitrificans RepID=I4WUS9_9GAMM
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:AGG87282.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_2119_curated_10
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8050..8745
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDI1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97522.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2119_curated_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8747..9976
DNA (1230bp) protein (410aa)
Amidohydrolase, imidazolonepropionase n=1 Tax=Rhodanobacter denitrificans RepID=M4NHH5_9GAMM
amidohydrolase, imidazolonepropionase
Amidohydrolase, imidazolonepropionase {ECO:0000313|EMBL:AGG87281.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_2119_curated_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10002..10784)
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NA54_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87280.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_2119_curated_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10920..11531
DNA (612bp) protein (204aa)
Putative NADH-flavin reductase n=1 Tax=Rhodanobacter denitrificans RepID=M4NCW4_9GAMM
putative NADH-flavin reductase
Putative NADH-flavin reductase {ECO:0000313|EMBL:AGG87278.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_2119_curated_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11581..11904
DNA (324bp) protein (108aa)
NADPH-dependent FMN reductase n=1 Tax=Rhodanobacter denitrificans RepID=I4WUS3_9GAMM
putative flavoprotein
Putative flavoprotein {ECO:0000313|EMBL:AGG87276.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_2119_curated_15
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11904..12062
DNA (159bp) protein (53aa)
NADPH-dependent FMN reductase n=1 Tax=Rhodanobacter denitrificans RepID=I4WUS3_9GAMM
putative flavoprotein
Putative flavoprotein {ECO:0000313|EMBL:AGG87276.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_2119_curated_16
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12126..12398)
DNA (273bp) protein (91aa)
L-glutamine synthetase (EC:6.3.1.2)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Glutamine synthetase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WC22_9GAMM
Displaying 16 items

View Taxonomy