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scnpilot_solids1_trim150_scaffold_1949_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1949_curated_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..538)
DNA (537bp) protein (179aa)
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains n=1 Tax=Rhodanobacter denitrificans RepID=M4NEB9_9GAMM
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains {ECO:0000313|EMBL:AGG87858.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1949_curated_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(753..2999)
DNA (2247bp) protein (749aa)
Trehalose/maltose hydrolase or phosphorylase n=1 Tax=Rhodanobacter denitrificans RepID=M4NB95_9GAMM
Trehalose/maltose hydrolase or phosphorylase {ECO:0000313|EMBL:AGG87859.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
trehalose/maltose hydrolase or phosphorylase
scnpilot_solids1_trim150_scaffold_1949_curated_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3028..4278)
DNA (1251bp) protein (417aa)
Fucose permease n=1 Tax=Rhodanobacter denitrificans RepID=M4NB64_9GAMM
fucose permease
Fucose permease {ECO:0000313|EMBL:AGG87860.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1949_curated_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4376..6916)
DNA (2541bp) protein (847aa)
Outer membrane receptor protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NJ82_9GAMM
Outer membrane receptor protein {ECO:0000313|EMBL:AGG87861.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
outer membrane receptor protein
scnpilot_solids1_trim150_scaffold_1949_curated_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6990..9965)
DNA (2976bp) protein (992aa)
Beta-phosphoglucomutase n=1 Tax=Rhodanobacter denitrificans RepID=M4NDC0_9GAMM
Beta-phosphoglucomutase {ECO:0000313|EMBL:AGG87862.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
beta-phosphoglucomutase
scnpilot_solids1_trim150_scaffold_1949_curated_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10323..11327
DNA (1005bp) protein (335aa)
Transcriptional regulator n=1 Tax=Rhodanobacter denitrificans RepID=M4NEC4_9GAMM
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AGG87863.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1949_curated_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11334..12983)
DNA (1650bp) protein (550aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Signal transduction histidine kinase n=1 Tax=Rhodanobacter denitrificans RepID=M4NB98_9GAMM
signal transduction histidine kinase
scnpilot_solids1_trim150_scaffold_1949_curated_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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13303..14466
DNA (1164bp) protein (388aa)
succinyl-CoA synthetase (ADP-forming) beta subunit (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Succinyl-CoA ligase [ADP-forming] subunit beta n=1 Tax=Rhodanobacter denitrificans RepID=M4NB67_9GAMM
scnpilot_solids1_trim150_scaffold_1949_curated_9
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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14481..15056
DNA (576bp) protein (192aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
succinyl-CoA synthetase (ADP-forming) alpha subunit (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WAP3_9GAMM
Displaying 9 items

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