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scnpilot_solids1_trim150_scaffold_1522_curated

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1522_curated_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..3109
DNA (3108bp) protein (1036aa)
Hydrophobe/amphiphile efflux-1 (HAE1) family transporter n=1 Tax=Rhodanobacter denitrificans RepID=I4WMU3_9GAMM
Acriflavin resistance protein {ECO:0000313|EMBL:EIL98146.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
cation/multidrug efflux pump
scnpilot_solids1_trim150_scaffold_1522_curated_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3310..3606
DNA (297bp) protein (99aa)
LysM domain-containing protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WMU2_9GAMM
LysM domain-containing protein
LysM domain-containing protein {ECO:0000313|EMBL:AGG90802.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1522_curated_3
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3622..4131
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WMU1_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_1522_curated_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4358..6583
DNA (2226bp) protein (742aa)
Isocitrate dehydrogenase {ECO:0000313|EMBL:EIL98159.1}; EC=1.1.1.42 {ECO:0000313|EMBL:EIL98159.1};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Isocitrate dehydrogenase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFB8_9GAMM
isocitrate dehydrogenase, NADP-dependent, monomeric type
scnpilot_solids1_trim150_scaffold_1522_curated_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6709..7710
DNA (1002bp) protein (334aa)
GumN protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WMS7_9GAMM
GumN protein
GumN protein {ECO:0000313|EMBL:AGG90796.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1522_curated_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7748..8692)
DNA (945bp) protein (315aa)
Putative oxidoreductase, aryl-alcohol dehydrogenase like protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NIL8_9GAMM
putative oxidoreductase, aryl-alcohol dehydrogenase like protein
Putative oxidoreductase, aryl-alcohol dehydrogenase like protein {ECO:0000313|EMBL:AGG90795.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1522_curated_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8799..9002)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NIR1_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90794.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1522_curated_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9112..10032
DNA (921bp) protein (307aa)
Transcriptional regulator n=1 Tax=Rhodanobacter denitrificans RepID=I4WMS4_9GAMM
Transcriptional regulator {ECO:0000313|EMBL:EIL98162.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
transcriptional regulator
scnpilot_solids1_trim150_scaffold_1522_curated_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10094..11206
DNA (1113bp) protein (371aa)
S-(hydroxymethyl)glutathione dehydrogenase {ECO:0000256|RuleBase:RU362016}; EC=1.1.1.284 {ECO:0000256|RuleBase:RU362016};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
S-(Hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase n=1 Tax=Rhodanobacter denitrificans RepID=M4NL41_9GAMM
S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase
scnpilot_solids1_trim150_scaffold_1522_curated_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11293..11955
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WMS2_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90791.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1522_curated_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12032..12970
DNA (939bp) protein (313aa)
Putative methyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NIL2_9GAMM
putative methyltransferase
Putative methyltransferase {ECO:0000313|EMBL:AGG90790.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1522_curated_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13005..13538
DNA (534bp) protein (178aa)
pseudouridine synthase family protein (EC:5.4.99.-)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Pseudouridine synthase n=1 Tax=Rhodanobacter denitrificans RepID=I4WMS0_9GAMM
scnpilot_solids1_trim150_scaffold_1522_curated_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13616..14413)
DNA (798bp) protein (266aa)
Mg-dependent DNase (EC:3.1.21.-)
Mg-dependent DNase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGF0_9GAMM
Mg-dependent DNase {ECO:0000313|EMBL:EIL98541.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids1_trim150_scaffold_1522_curated_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14614..16203
DNA (1590bp) protein (530aa)
Peptidase M4, thermolysin n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQB5_9GAMM
Peptidase M4, thermolysin {ECO:0000313|EMBL:EIL89406.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Zinc metalloprotease (elastase)
scnpilot_solids1_trim150_scaffold_1522_curated_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16335..18014
DNA (1680bp) protein (560aa)
Autotransporter adhesin (Fragment) n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQB4_9GAMM
Autotransporter adhesin {ECO:0000313|EMBL:EIL89405.1}; Flags: Fragment;; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
xadA; Xanthomonas adhesin-like protein A
scnpilot_solids1_trim150_scaffold_1522_curated_16
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18191..19336
DNA (1146bp) protein (382aa)
Type II secretion system protein E (GspE) n=1 Tax=Rhodanobacter denitrificans RepID=M4NL36_9GAMM
type II secretion system protein E (GspE)
Type II secretion system protein E (GspE) {ECO:0000313|EMBL:AGG90787.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying 16 items

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