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scnpilot_solids1_trim150_scaffold_1654_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1654_curated_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..1058
DNA (1056bp) protein (352aa)
Cysteine desulfurase activator complex subunit SufB n=1 Tax=Rhodanobacter denitrificans RepID=I4WNT0_9GAMM
Iron-regulated ABC transporter membrane component SufB
Iron-regulated ABC transporter membrane component SufB {ECO:0000313|EMBL:AGG88229.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1654_curated_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1200..1952
DNA (753bp) protein (251aa)
FeS assembly ATPase SufC n=1 Tax=Rhodanobacter denitrificans RepID=I4WNT1_9GAMM
FeS assembly ATPase SufC
FeS assembly ATPase SufC {ECO:0000313|EMBL:AGG88230.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1654_curated_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1949..3268
DNA (1320bp) protein (440aa)
FeS assembly protein SufD n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WEE4_9GAMM
FeS assembly protein SufD {ECO:0000313|EMBL:EIL97835.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Iron-regulated ABC transporter permease protein SufD
scnpilot_solids1_trim150_scaffold_1654_curated_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3403..4647
DNA (1245bp) protein (415aa)
cysteine desulfurase-like protein, SufS subfamily (EC:2.8.1.7)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Cysteine desulfurase n=1 Tax=Rhodanobacter denitrificans RepID=I4WNT3_9GAMM
scnpilot_solids1_trim150_scaffold_1654_curated_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4723..5637
DNA (915bp) protein (305aa)
Putative acyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WEE2_9GAMM
Putative acyltransferase {ECO:0000313|EMBL:EIL97833.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
1-acyl-sn-glycerol-3-phosphate acyltransferase
scnpilot_solids1_trim150_scaffold_1654_curated_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5639..6559
DNA (921bp) protein (307aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
ketopantoate reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WEE1_9GAMM
scnpilot_solids1_trim150_scaffold_1654_curated_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6622..8658)
DNA (2037bp) protein (679aa)
endothelin-converting enzyme (EC:3.4.24.71)
Endothelin-converting enzyme {ECO:0000313|EMBL:AGG88235.1}; EC=3.4.24.71 {ECO:0000313|EMBL:AGG88235.1};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Putative metalloendopeptidase n=1 Tax=Rhodanobacter denitrificans RepID=I4WNT6_9GAMM
scnpilot_solids1_trim150_scaffold_1654_curated_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8835..9383
DNA (549bp) protein (183aa)
GCN5-like N-acetyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WLV8_9GAMM
GCN5-like N-acetyltransferase {ECO:0000313|EMBL:EIM00450.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative acyltransferase
scnpilot_solids1_trim150_scaffold_1654_curated_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9380..9694
DNA (315bp) protein (105aa)
Ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase n=1 Tax=Rhodanobacter denitrificans RepID=I4WNT8_9GAMM
ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase
Ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase {ECO:0000313|EMBL:AGG88237.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1654_curated_10
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9728..10516
DNA (789bp) protein (263aa)
CAAX amino terminal protease family n=1 Tax=Rhodanobacter denitrificans RepID=M4NF62_9GAMM
CAAX amino terminal protease family
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_1654_curated_11
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10490..11269)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WNU0_9GAMM
outer membrane protein V
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_1654_curated_12
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11410..12111
DNA (702bp) protein (234aa)
Putative phosphatase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WLV5_9GAMM
Putative phosphatase {ECO:0000313|EMBL:EIM00447.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
haloacid dehalogenase superfamily protein, phosphoserine phosphatase/2,3-diketo-5-methylthio-1-phosphopentane phosphatase
scnpilot_solids1_trim150_scaffold_1654_curated_13
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12159..12647
DNA (489bp) protein (163aa)
adenosylmethionine-8-amino-7-oxononanoate aminotransferase n=1 Tax=Dyella ginsengisoli RepID=UPI000346863F
4-aminobutyrate aminotransferase family protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
Displaying 13 items

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