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scnpilot_solids1_trim150_scaffold_544_curated

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_544_curated_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..813
DNA (813bp) protein (271aa)
K(+)-insensitive pyrophosphate-energized proton pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound proton-translocating pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; Pyrophosphate-energized inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
K(+)-insensitive pyrophosphate-energized proton pump n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDU2_9GAMM
vacuolar-type H(+)-translocating pyrophosphatase
scnpilot_solids1_trim150_scaffold_544_curated_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

957..3089
DNA (2133bp) protein (711aa)
Prolyl oligopeptidase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDU3_9GAMM
Prolyl oligopeptidase {ECO:0000313|EMBL:EIL97634.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
serine protease, S9A family peptidase
scnpilot_solids1_trim150_scaffold_544_curated_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3208..4062
DNA (855bp) protein (285aa)
2OG-Fe(II) oxygenase superfamily enzyme n=1 Tax=Rhodanobacter denitrificans RepID=I4WHP4_9GAMM
2OG-Fe(II) oxygenase superfamily enzyme
2OG-Fe(II) oxygenase superfamily enzyme {ECO:0000313|EMBL:AGG87546.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_544_curated_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4158..4697
DNA (540bp) protein (180aa)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Inorganic pyrophosphatase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDU5_9GAMM
inorganic pyrophosphatase
scnpilot_solids1_trim150_scaffold_544_curated_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4757..5779)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDU6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97637.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_544_curated_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5972..6988
DNA (1017bp) protein (339aa)
Zinc-binding alcohol dehydrogenase family protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NDM0_9GAMM
zinc-binding alcohol dehydrogenase family protein
Zinc-binding alcohol dehydrogenase family protein {ECO:0000313|EMBL:AGG87543.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_544_curated_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7022..7618)
DNA (597bp) protein (199aa)
Bacterioferritin (Cytochrome b1) n=1 Tax=Rhodanobacter denitrificans RepID=I4WHP0_9GAMM
bacterioferritin (cytochrome b1)
Bacterioferritin (Cytochrome b1) {ECO:0000313|EMBL:AGG87542.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_544_curated_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7752..8399)
DNA (648bp) protein (216aa)
Transcriptional regulator n=1 Tax=Rhodanobacter denitrificans RepID=I4WHN9_9GAMM
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AGG87541.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_544_curated_9
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8672..9331
DNA (660bp) protein (220aa)
Protein-L-isoaspartate carboxylmethyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDV0_9GAMM
Protein-L-isoaspartate carboxylmethyltransferase {ECO:0000313|EMBL:EIL97641.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
protein-L-isoaspartate carboxylmethyltransferase
scnpilot_solids1_trim150_scaffold_544_curated_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9366..10667
DNA (1302bp) protein (434aa)
TolC family type I secretion outer membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WHN7_9GAMM
type I secretion outer membrane protein, TolC family
Type I secretion outer membrane protein, TolC family {ECO:0000313|EMBL:AGG87539.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_544_curated_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10731..11972)
DNA (1242bp) protein (414aa)
3-deoxy-D-manno-octulosonic-acid transferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WHN6_9GAMM
3-deoxy-D-manno-octulosonic-acid transferase
3-deoxy-D-manno-octulosonic-acid transferase {ECO:0000313|EMBL:AGG87538.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_544_curated_12
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12114..13040
DNA (927bp) protein (309aa)
Lipid A biosynthesis lauroyltransferase {ECO:0000256|HAMAP-Rule:MF_01942}; EC=2.3.1.241 {ECO:0000256|HAMAP-Rule:MF_01942};; Kdo(2)-lipid IV(A) lauroyltransferase {ECO:0000256|HAMAP-Rule:MF_01942}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Lipid A biosynthesis lauroyl acyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDV3_9GAMM
lipid A biosynthesis lauroyl/palmitoleoyl acyltransferase
scnpilot_solids1_trim150_scaffold_544_curated_13
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13272..14018
DNA (747bp) protein (249aa)
Polysaccharide deacetylase n=1 Tax=Rhodanobacter denitrificans RepID=I4WHN4_9GAMM
putative xylanase/chitin deacetylase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_544_curated_14
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14015..15091
DNA (1077bp) protein (359aa)
Glycosyl transferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDV5_9GAMM
Glycosyl transferase {ECO:0000313|EMBL:EIL97646.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
glycosyltransferase
scnpilot_solids1_trim150_scaffold_544_curated_15
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15102..15854)
DNA (753bp) protein (251aa)
Glycosyl transferase family protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDV6_9GAMM
Glycosyl transferase family protein {ECO:0000313|EMBL:EIL97647.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
glycosyl transferase
scnpilot_solids1_trim150_scaffold_544_curated_16
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15844..17175)
DNA (1332bp) protein (444aa)
Lipid A core--O-antigen ligase-like protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WHN1_9GAMM
lipid A core-O-antigen ligase-like enyme
Lipid A core-O-antigen ligase-like enyme {ECO:0000313|EMBL:AGG87533.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_544_curated_17
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17243..18394)
DNA (1152bp) protein (384aa)
Glycosyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NCN1_9GAMM
glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:AGG87532.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_544_curated_18
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18449..18658)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WHM9_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87531.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_544_curated_19
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18861..20126
DNA (1266bp) protein (422aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WHM8_9GAMM
Na+/proline symporter
Na+/proline symporter {ECO:0000313|EMBL:AGG87530.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_544_curated_20
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20192..20785)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WHM7_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87529.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_544_curated_21
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20821..21414)
DNA (594bp) protein (198aa)
Putative NADH dehydrogenase/NAD(P)H nitroreductase R2APBS1_0352 {ECO:0000256|HAMAP-Rule:MF_01204}; EC=1.-.-.- {ECO:0000256|HAMAP-Rule:MF_01204};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Putative NADH dehydrogenase/NAD(P)H nitroreductase UUC_16525 n=1 Tax=Rhodanobacter denitrificans RepID=I4WHM6_9GAMM
nitroreductase
scnpilot_solids1_trim150_scaffold_544_curated_22
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21549..22535
DNA (987bp) protein (329aa)
Putative nucleoside-diphosphate-sugar epimerase n=1 Tax=Rhodanobacter denitrificans RepID=I4WHM5_9GAMM
putative nucleoside-diphosphate-sugar epimerase
Putative nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:AGG87527.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_544_curated_23
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22543..25386)
DNA (2844bp) protein (948aa)
Glutamate-ammonia-ligase adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015000}; EC=2.7.7.42 {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015004};; Glutamine-synthase adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802}; [Glutamate--ammonia-ligase] adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Glutamate-ammonia-ligase adenylyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WHM4_9GAMM
glutamine synthetase adenylyltransferase
scnpilot_solids1_trim150_scaffold_544_curated_24
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25504..27384
DNA (1881bp) protein (627aa)
Phosphoglycerol transferase family protein, alkaline phosphatase superfamily n=1 Tax=Rhodanobacter denitrificans RepID=M4NAI8_9GAMM
phosphoglycerol transferase family protein, alkaline phosphatase superfamily
Phosphoglycerol transferase family protein, alkaline phosphatase superfamily {ECO:0000313|EMBL:AGG87525.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_544_curated_25
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27561..28094
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NAL5_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87524.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_544_curated_26
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28235..29887)
DNA (1653bp) protein (551aa)
60 kDa chaperonin n=1 Tax=Rhodanobacter denitrificans RepID=I4WHM1_9GAMM
chaperonin GroL
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying 26 items

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