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scnpilot_solids1_trim150_scaffold_322_curated

Search features with annotation key words

Displaying items 1-30 of 83 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_322_curated_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..434)
DNA (432bp) protein (144aa)
RNA polymerase sigma factor RpoD n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WV09_9GAMM
RNA polymerase, sigma 70 subunit, RpoD
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_322_curated_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(602..1042)
DNA (441bp) protein (147aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160054}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WV08_9GAMM
D-tyrosyl-tRNA(Tyr) deacylase
scnpilot_solids1_trim150_scaffold_322_curated_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1127..2020
DNA (894bp) protein (298aa)
Lauroyl/myristoyl acyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NCB1_9GAMM
Lauroyl/myristoyl acyltransferase
Lauroyl/myristoyl acyltransferase {ECO:0000313|EMBL:AGG87407.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_322_curated_4
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2040..2786)
DNA (747bp) protein (249aa)
Pteridine reductase n=1 Tax=Rhodanobacter denitrificans RepID=I4WX46_9GAMM
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_322_curated_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2854..3468)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WX47_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87409.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_322_curated_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3639..5816
DNA (2178bp) protein (726aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NAC3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:AGG87410.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_322_curated_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5895..7088
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WX49_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87411.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_322_curated_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7093..7503
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WV02_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM03294.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
VanZ like family protein
scnpilot_solids1_trim150_scaffold_322_curated_9
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7480..9708)
DNA (2229bp) protein (743aa)
Phosphoglycerol transferase family protein, alkaline phosphatase superfamily n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WV01_9GAMM
Phosphoglycerol transferase family protein, alkaline phosphatase superfamily {ECO:0000313|EMBL:EIM03293.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
phosphoglycerol transferase family protein, alkaline phosphatase superfamily
scnpilot_solids1_trim150_scaffold_322_curated_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10053..11279)
DNA (1227bp) protein (409aa)
Multifunctional CCA protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WX52_9GAMM
tRNA nucleotidyltransferase/poly(A) polymerase
Multifunctional CCA protein {ECO:0000256|HAMAP-Rule:MF_01261, ECO:0000256|SAAS:SAAS00054545}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_322_curated_11
Pseudomonas denitrificans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11465..12610)
DNA (1146bp) protein (382aa)
hypothetical protein n=1 Tax=Pseudomonas fluorescens RepID=UPI0003144158
hypothetical protein
Peptidase M50, membrane-associated zinc metallopeptidase {ECO:0000313|EMBL:AGI25368.1}; TaxID=1294143 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas denitrificans ATCC 13867.;"
scnpilot_solids1_trim150_scaffold_322_curated_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12872..13519)
DNA (648bp) protein (216aa)
Bifunctional deaminase-reductase domain protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WX56_9GAMM
dihydrofolate reductase
Dihydrofolate reductase {ECO:0000313|EMBL:AGG87422.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_322_curated_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13686..15275
DNA (1590bp) protein (530aa)
Tetratricopeptide repeat protein,sulfotransferase family protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NAD1_9GAMM
tetratricopeptide repeat protein,sulfotransferase family protein
Tetratricopeptide repeat protein,sulfotransferase family protein {ECO:0000313|EMBL:AGG87425.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_322_curated_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15291..16229)
DNA (939bp) protein (313aa)
Putative nucleoside-diphosphate sugar epimerase n=1 Tax=Rhodanobacter denitrificans RepID=I4WX60_9GAMM
putative nucleoside-diphosphate sugar epimerase
Putative nucleoside-diphosphate sugar epimerase {ECO:0000313|EMBL:AGG87426.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_322_curated_15
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16250..18283)
DNA (2034bp) protein (678aa)
Soluble lytic murein transglycosylase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WUZ6_9GAMM
Soluble lytic murein transglycosylase {ECO:0000313|EMBL:EIM03288.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
soluble lytic murein transglycosylase-like protein
scnpilot_solids1_trim150_scaffold_322_curated_16
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18413..20002
DNA (1590bp) protein (530aa)
Exo-beta-1,3-glucanase n=1 Tax=Rhodanobacter denitrificans RepID=M4NDA7_9GAMM
exo-beta-1,3-glucanase
Exo-beta-1,3-glucanase {ECO:0000313|EMBL:AGG87428.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_322_curated_17
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19916..20329)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NAE5_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87429.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_322_curated_18
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20326..21138)
DNA (813bp) protein (271aa)
Metal-dependent hydrolase n=1 Tax=Rhodanobacter denitrificans RepID=I4WCU0_9GAMM
metal-dependent hydrolase
Metal-dependent hydrolase {ECO:0000313|EMBL:AGG87430.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_322_curated_19
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21262..21912)
DNA (651bp) protein (217aa)
Thiol:disulfide interchange protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WCU1_9GAMM
protein-disulfide isomerase
Thiol:disulfide interchange protein {ECO:0000256|PIRNR:PIRNR001488}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_322_curated_20
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21973..22863)
DNA (891bp) protein (297aa)
Protein-disulfide isomerase n=1 Tax=Rhodanobacter denitrificans RepID=M4NCD8_9GAMM
protein-disulfide isomerase
Protein-disulfide isomerase {ECO:0000313|EMBL:AGG87432.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_322_curated_21
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22928..23677)
DNA (750bp) protein (250aa)
Cytochrome c553 n=1 Tax=Rhodanobacter denitrificans RepID=M4NDB2_9GAMM
cytochrome c553
Cytochrome c553 {ECO:0000313|EMBL:AGG87433.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_322_curated_22
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23795..24466
DNA (672bp) protein (224aa)
Probable GTP-binding protein EngB n=1 Tax=Rhodanobacter denitrificans RepID=I4WS88_9GAMM
cell division checkpoint GTPase YihA
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_322_curated_23
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24516..25007)
DNA (492bp) protein (164aa)
GAF sensor protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WS86_9GAMM
GAF domain-containing protein
GAF domain-containing protein {ECO:0000313|EMBL:AGG87436.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_322_curated_24
unknown

Not on your lists

25065..25208
DNA (144bp) protein (48aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_322_curated_25
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25218..25718
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NDB7_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87438.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_322_curated_26
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25715..27061
DNA (1347bp) protein (449aa)
Signal transduction protein containing GAF and PtsI domains n=1 Tax=Rhodanobacter denitrificans RepID=M4NAF2_9GAMM
signal transduction protein containing GAF and PtsI domains
Signal transduction protein containing GAF and PtsI domains {ECO:0000313|EMBL:AGG87439.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_322_curated_27
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27058..27765)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NAE2_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87440.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_322_curated_28
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28039..28719
DNA (681bp) protein (227aa)
ATP-dependent dethiobiotin synthetase BioD {ECO:0000256|HAMAP-Rule:MF_00336}; EC=6.3.3.3 {ECO:0000256|HAMAP-Rule:MF_00336};; DTB synthetase {ECO:0000256|HAMAP-Rule:MF_00336}; Dethiobiotin synthase {ECO:0000256|HAMAP-Rule:MF_00336}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
ATP-dependent dethiobiotin synthetase BioD n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WHE1_9GAMM
dethiobiotin synthase
scnpilot_solids1_trim150_scaffold_322_curated_29
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28772..29119
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WHE0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL98881.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_322_curated_30
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29224..31410
DNA (2187bp) protein (729aa)
Peptidyl-dipeptidase Dcp n=1 Tax=Rhodanobacter denitrificans RepID=I4WSF1_9GAMM
Zn-dependent oligopeptidase {ECO:0000313|EMBL:AGG87443.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Zn-dependent oligopeptidase
Displaying items 1-30 of 83 in total

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