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scnpilot_solids1_trim150_scaffold_1050_curated

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1050_curated_1
unknown

Not on your lists

3..104
DNA (102bp) protein (34aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1050_curated_2
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

240..431
DNA (192bp) protein (64aa)
Putative Fe-S oxidoreductase n=1 Tax=Rhodanobacter denitrificans RepID=M4NJ89_9GAMM
putative Fe-S oxidoreductase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_1050_curated_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

543..1097
DNA (555bp) protein (185aa)
TonB protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WC28_9GAMM
TonB protein {ECO:0000313|EMBL:EIL97019.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1050_curated_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1105..1638)
DNA (534bp) protein (178aa)
Transferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WC29_9GAMM
Transferase {ECO:0000313|EMBL:EIL97020.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
isoleucine patch superfamily enzyme, carbonic anhydrase/acetyltransferase
scnpilot_solids1_trim150_scaffold_1050_curated_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1737..3794
DNA (2058bp) protein (686aa)
Zn-dependent oligopeptidase n=1 Tax=Rhodanobacter denitrificans RepID=I4WNA9_9GAMM
Zn-dependent oligopeptidase
Zn-dependent oligopeptidase {ECO:0000313|EMBL:AGG90987.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1050_curated_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3954..4163)
DNA (210bp) protein (70aa)
Cold acclimation protein B n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WC31_9GAMM
Cold acclimation protein B {ECO:0000313|EMBL:EIL97022.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
cold shock protein
scnpilot_solids1_trim150_scaffold_1050_curated_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4388..5176
DNA (789bp) protein (263aa)
Exodeoxyribonuclease III (EC:3.1.11.2)
Exodeoxyribonuclease III {ECO:0000313|EMBL:AGG90985.1}; EC=3.1.11.2 {ECO:0000313|EMBL:AGG90985.1};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Exodeoxyribonuclease III n=1 Tax=Rhodanobacter denitrificans RepID=I4WNB1_9GAMM
scnpilot_solids1_trim150_scaffold_1050_curated_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5173..5850
DNA (678bp) protein (226aa)
YecA family protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NJC8_9GAMM
yecA family protein
YecA family protein {ECO:0000313|EMBL:AGG90984.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1050_curated_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6030..6863
DNA (834bp) protein (278aa)
Pirin-related protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NLR4_9GAMM
Pirin-related protein
Pirin-related protein {ECO:0000313|EMBL:AGG90982.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1050_curated_10
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6982..7803)
DNA (822bp) protein (274aa)
Sugar ABC transporter permease n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WC36_9GAMM
Sugar ABC transporter permease {ECO:0000313|EMBL:EIL97027.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family
scnpilot_solids1_trim150_scaffold_1050_curated_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7800..8678)
DNA (879bp) protein (293aa)
Carbohydrate ABC transporter membrane protein 1, CUT1 family n=1 Tax=Rhodanobacter denitrificans RepID=I4WNB6_9GAMM
carbohydrate ABC transporter membrane protein 1, CUT1 family
Sugar ABC transporter permease {ECO:0000313|EMBL:EIL90847.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids1_trim150_scaffold_1050_curated_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8675..9982)
DNA (1308bp) protein (436aa)
Carbohydrate ABC transporter substrate-binding protein, CUT1 family n=1 Tax=Rhodanobacter denitrificans RepID=M4NJC3_9GAMM
carbohydrate ABC transporter substrate-binding protein, CUT1 family
Carbohydrate ABC transporter substrate-binding protein, CUT1 family {ECO:0000313|EMBL:AGG90979.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1050_curated_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9979..11442)
DNA (1464bp) protein (488aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WNB8_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90978.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1050_curated_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11577..14387)
DNA (2811bp) protein (937aa)
Outer membrane receptor protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NLR1_9GAMM
Outer membrane receptor protein {ECO:0000313|EMBL:AGG90977.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
outer membrane receptor protein
scnpilot_solids1_trim150_scaffold_1050_curated_15
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14555..15628)
DNA (1074bp) protein (358aa)
LacI family transcriptional regulator n=1 Tax=Rhodanobacter denitrificans RepID=I4WNC0_9GAMM
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AGG90976.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1050_curated_16
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15982..16431
DNA (450bp) protein (150aa)
Membrane protease subunit, stomatin/prohibitin n=1 Tax=Rhodanobacter denitrificans RepID=I4WNC1_9GAMM
membrane protease subunit, stomatin/prohibitin
Membrane protease subunit, stomatin/prohibitin {ECO:0000313|EMBL:AGG90975.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1050_curated_17
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16581..17210
DNA (630bp) protein (210aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.170 {ECO:0000256|HAMAP-Rule:MF_00074};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
16S rRNA m(7)G-527 methyltransferase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WC44_9GAMM
scnpilot_solids1_trim150_scaffold_1050_curated_18
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17220..18575)
DNA (1356bp) protein (452aa)
Beta-glucosidase {ECO:0000256|RuleBase:RU361175}; EC=3.2.1.21 {ECO:0000256|RuleBase:RU361175};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Beta-glucosidase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WC45_9GAMM
beta-galactosidase
scnpilot_solids1_trim150_scaffold_1050_curated_19
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18709..19800
DNA (1092bp) protein (364aa)
Multiple sugar ABC transporter ATP-binding protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WNC4_9GAMM
carbohydrate ABC transporter ATP-binding protein, CUT1 family
Carbohydrate ABC transporter ATP-binding protein, CUT1 family {ECO:0000313|EMBL:AGG90972.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1050_curated_20
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19878..20747
DNA (870bp) protein (290aa)
Chromosome partitioning protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WNC5_9GAMM
ATPase involved in chromosome partitioning
ATPase involved in chromosome partitioning {ECO:0000313|EMBL:AGG90971.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1050_curated_21
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20751..21620
DNA (870bp) protein (290aa)
ParB-like partition protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NJ74_9GAMM
ParB-like partition protein
ParB-like partition protein {ECO:0000313|EMBL:AGG90970.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1050_curated_22
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21845..22561
DNA (717bp) protein (239aa)
Glycosyl transferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NJB1_9GAMM
glycosyl transferase
Glycosyl transferase {ECO:0000313|EMBL:AGG90969.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1050_curated_23
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22626..22994
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WNC8_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90968.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1050_curated_24
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22991..23926)
DNA (936bp) protein (312aa)
Putative esterase of the alpha-beta hydrolase superfamily protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WC55_9GAMM
Putative esterase of the alpha-beta hydrolase superfamily protein {ECO:0000313|EMBL:EIL97046.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative esterase of the alpha-beta hydrolase superfamily
scnpilot_solids1_trim150_scaffold_1050_curated_25
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23938..25020)
DNA (1083bp) protein (361aa)
Putative transcriptional regulator n=1 Tax=Rhodanobacter denitrificans RepID=M4NU68_9GAMM
putative transcriptional regulator
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_1050_curated_26
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25031..25936
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WND1_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90965.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1050_curated_27
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26034..26843
DNA (810bp) protein (270aa)
Putative salt-induced outer membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WND2_9GAMM
putative salt-induced outer membrane protein
Putative salt-induced outer membrane protein {ECO:0000313|EMBL:AGG90964.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1050_curated_28
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26992..27909)
DNA (918bp) protein (306aa)
hydroxymethylbilane synthase (EC:2.5.1.61)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Porphobilinogen deaminase n=1 Tax=Rhodanobacter denitrificans RepID=I4WND3_9GAMM
scnpilot_solids1_trim150_scaffold_1050_curated_29
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28033..28788
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WAH4_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_1050_curated_30
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28852..30900)
DNA (2049bp) protein (683aa)
transketolase (EC:2.2.1.1)
Transketolase {ECO:0000256|RuleBase:RU004996}; EC=2.2.1.1 {ECO:0000256|RuleBase:RU004996};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Transketolase n=1 Tax=Rhodanobacter denitrificans RepID=I4WND5_9GAMM
Displaying items 1-30 of 42 in total

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