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scnpilot_solids1_trim150_scaffold_1109_curated

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Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1109_curated_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

318..1751
DNA (1434bp) protein (478aa)
Peptidase M28 n=1 Tax=Rhodanobacter denitrificans RepID=I4WVV2_9GAMM
putative aminopeptidase
Putative aminopeptidase {ECO:0000313|EMBL:AGG90392.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1109_curated_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1796..2179)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WT45_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM02637.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1109_curated_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2238..5345)
DNA (3108bp) protein (1036aa)
Acriflavin resistance protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WVV4_9GAMM
Cation/multidrug efflux pump {ECO:0000313|EMBL:AGG90394.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
cation/multidrug efflux pump
scnpilot_solids1_trim150_scaffold_1109_curated_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5350..6462)
DNA (1113bp) protein (371aa)
Secretion protein HlyD n=1 Tax=Rhodanobacter denitrificans RepID=I4WVV5_9GAMM
RND family efflux transporter, MFP subunit
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:AGG90395.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1109_curated_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6678..7133)
DNA (456bp) protein (152aa)
Putative MarR family transcriptional regulator n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WT42_9GAMM
Putative MarR family transcriptional regulator {ECO:0000313|EMBL:EIM02634.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
transcriptional regulator
scnpilot_solids1_trim150_scaffold_1109_curated_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7194..7712
DNA (519bp) protein (173aa)
Putative phosphatase, C-terminal domain of histone macro H2A1 like protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NJY0_9GAMM
putative phosphatase, C-terminal domain of histone macro H2A1 like protein
Putative phosphatase, C-terminal domain of histone macro H2A1 like protein {ECO:0000313|EMBL:AGG90397.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1109_curated_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7789..9483)
DNA (1695bp) protein (565aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NL51_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90398.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1109_curated_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9480..11366)
DNA (1887bp) protein (629aa)
Tetratricopeptide repeat protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NHL9_9GAMM
Tetratricopeptide repeat protein {ECO:0000313|EMBL:AGG90399.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
tetratricopeptide repeat protein
scnpilot_solids1_trim150_scaffold_1109_curated_9
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11363..12349)
DNA (987bp) protein (329aa)
Mg-chelatase subunit ChlD n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNG0_9GAMM
Mg-chelatase subunit ChlD {ECO:0000313|EMBL:EIM01002.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Mg-chelatase subunit ChlD
scnpilot_solids1_trim150_scaffold_1109_curated_10
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12342..12860)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNG1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM01003.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1109_curated_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12857..13792)
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNG2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM01004.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1109_curated_12
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13789..14784)
DNA (996bp) protein (332aa)
MoxR-like ATPase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNG3_9GAMM
MoxR-like ATPase {ECO:0000313|EMBL:EIM01005.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
MoxR-like ATPase
scnpilot_solids1_trim150_scaffold_1109_curated_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14967..17147)
DNA (2181bp) protein (727aa)
Type IV pilus secretin PilQ/competence protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NHM4_9GAMM
Type IV pilus secretin PilQ/competence protein {ECO:0000313|EMBL:AGG90404.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
type IV pilus secretin PilQ/competence protein
scnpilot_solids1_trim150_scaffold_1109_curated_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17168..17713)
DNA (546bp) protein (182aa)
Tfp pilus assembly protein PilP n=1 Tax=Rhodanobacter denitrificans RepID=M4NHH9_9GAMM
Tfp pilus assembly protein PilP
Tfp pilus assembly protein PilP {ECO:0000313|EMBL:AGG90405.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1109_curated_15
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17710..18363)
DNA (654bp) protein (218aa)
Fimbrial assembly membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WVW6_9GAMM
Tfp pilus assembly protein PilO
Tfp pilus assembly protein PilO {ECO:0000313|EMBL:AGG90406.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1109_curated_16
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18360..19055)
DNA (696bp) protein (232aa)
Fimbrial assembly membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WVW7_9GAMM
Tfp pilus assembly protein PilN
Tfp pilus assembly protein PilN {ECO:0000313|EMBL:AGG90407.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1109_curated_17
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19055..20113)
DNA (1059bp) protein (353aa)
Fimbrial assembly membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WVW8_9GAMM
type IV pilus assembly protein PilM
Type IV pilus assembly protein PilM {ECO:0000313|EMBL:AGG90408.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1109_curated_18
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20386..22914
DNA (2529bp) protein (843aa)
Penicillin-binding protein, 1A family n=1 Tax=Rhodanobacter denitrificans RepID=M4NHN1_9GAMM
Penicillin-binding protein, 1A family {ECO:0000313|EMBL:AGG90409.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
penicillin-binding protein, 1A family
scnpilot_solids1_trim150_scaffold_1109_curated_19
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22973..23644
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NHI6_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90410.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1109_curated_20
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23715..25010)
DNA (1296bp) protein (432aa)
citrate synthase I, hexameric type (EC:2.3.3.1)
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369, ECO:0000256|RuleBase:RU003370}; EC=2.3.3.16 {ECO:0000256|RuleBase:RU003370};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Citrate synthase n=1 Tax=Rhodanobacter denitrificans RepID=I4WVX1_9GAMM
scnpilot_solids1_trim150_scaffold_1109_curated_21
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(25287..25541)
DNA (255bp) protein (85aa)
50S ribosomal protein L31 type B n=1 Tax=Rhodanobacter denitrificans RepID=I4WVX2_9GAMM
ribosomal protein L31
50S ribosomal protein L31 type B {ECO:0000256|HAMAP-Rule:MF_00502, ECO:0000256|SAAS:SAAS00004504}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1109_curated_22
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25611..26546)
DNA (936bp) protein (312aa)
Inosine-uridine nucleoside N-ribohydrolase n=1 Tax=Rhodanobacter denitrificans RepID=M4NL66_9GAMM
Inosine-uridine nucleoside N-ribohydrolase
Inosine-uridine nucleoside N-ribohydrolase {ECO:0000313|EMBL:AGG90413.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1109_curated_23
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26598..28715)
DNA (2118bp) protein (706aa)
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:AGG90414.1}; EC=3.6.1.- {ECO:0000313|EMBL:AGG90414.1};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
ATP-dependent DNA helicase RecG (EC:3.6.1.-)
ATP-dependent DNA helicase RecG n=1 Tax=Rhodanobacter denitrificans RepID=I4WVX4_9GAMM
scnpilot_solids1_trim150_scaffold_1109_curated_24
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28798..29181)
DNA (384bp) protein (128aa)
Endoribonuclease L-PSP n=1 Tax=Rhodanobacter denitrificans RepID=I4WVX5_9GAMM
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:AGG90415.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1109_curated_25
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29256..31421)
DNA (2166bp) protein (722aa)
RelA/SpoT family (P)ppGpp synthetase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNH6_9GAMM
RelA/SpoT family (P)ppGpp synthetase {ECO:0000313|EMBL:EIM01018.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
(p)ppGpp synthetase, RelA/SpoT family
scnpilot_solids1_trim150_scaffold_1109_curated_26
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31548..31838)
DNA (291bp) protein (97aa)
DNA-directed RNA polymerase subunit omega (EC:2.7.7.6)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanoba
DNA-directed RNA polymerase subunit omega n=3 Tax=Rhodanobacter RepID=I4WVX7_9GAMM
scnpilot_solids1_trim150_scaffold_1109_curated_27
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32037..32867
DNA (831bp) protein (277aa)
Surface lipoprotein n=1 Tax=Rhodanobacter denitrificans RepID=I4WVX8_9GAMM
surface lipoprotein
Surface lipoprotein {ECO:0000313|EMBL:AGG90418.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1109_curated_28
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32938..33246)
DNA (309bp) protein (103aa)
Putative NTP binding protein (Contains STAS domain) n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNH9_9GAMM
Putative NTP binding protein (Contains STAS domain) {ECO:0000313|EMBL:EIM01021.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative NTP binding protein (contains STAS domain)
scnpilot_solids1_trim150_scaffold_1109_curated_29
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33243..33917)
DNA (675bp) protein (225aa)
ABC-type transport system involved in resistance to organic solvents, auxiliary component n=1 Tax=Rhodanobacter denitrificans RepID=I4WVY0_9GAMM
ABC-type transport system involved in resistance to organic solvents, auxiliary component
ABC-type transport system involved in resistance to organic solvents, auxiliary component {ECO:0000313|EMBL:AGG90420.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1109_curated_30
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33969..34820)
DNA (852bp) protein (284aa)
Organic solvent resistance ABC transporter periplasmic protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNI1_9GAMM
Organic solvent resistance ABC transporter periplasmic protein {ECO:0000313|EMBL:EIM01023.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
ABC-type transport system involved in resistance to organic solvents, periplasmic component
Displaying items 1-30 of 31 in total

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